Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0088 ATGTCCGTGCTAATCGTCACGAGCTTAGGAGACATAGTGGTCGATCTGTTCACCGATAAATGCCCGTTGACAAGTAAAAATTTCTTGAAGCTTTGCAAGATTAAGTACTACAATGGGTGTCTTTTTCACACTATTCAGAAAGACTTCACTGCTCAGACTGGTGATCCAACTGGAATTGGGAGTAGTGGTGATTCAATCTACAAATTTCTCTATGGTGATCAAGCTCGCTTTTTTAGTGATGAGATCCATATTGATTTAAAGCATTCTAAGACTGGTACAGTTGCCATGGCTAGTGCTGGAGAGAACCTGAATGCTTCCCAGTTTTACATCACGCTGCGTGATAATCTTGATTACCTTGATGGAAAGCACACTGTTTTTGGCGAGGTAGCTGAAGGACTTGACACTTTGACTAGAATTAATGAGGCTTATGTGGATGAGAATGGGAGACCTTACAAAAATATCCGAATCAAGCATACTTACATCTTGGATGATCCTTTTGATGATCCTCCTCAGATAACTGAGTTAATTCCTGAAGCCTCACCAGAAGGAAAGCCGAAAGATGAGATTGTTGATGAAGTGAGGCTTGAAGATGATTGGGTGCCCATGGATGAACAAATAGATCCAGCAGAGCTCGAGGAGGTTATTAGAACAAAGGAAGCACATTCTAGAGCTGTTGTACTTGAGAGTATTGGAGATATTCCTGATGCTGAGATCAAGCCTCCTGACAATGTGCTTTTTGTCTGTAAATTGAACCCAGTTACTGAGGATGAGGACTTGCATACTATATTTTCACGCTTTGGGACTGTGGTATCGGCTGAAATTATCCGTGATCACAAGACTGGTGACAGTTTATGCTATGCTTTCATAGAGTTTGAGAATAAGCCGGCATGTGAACAAGCATATTTTAAGATGGATAATGCTTTGATTGATGATCGGAGAATACATGTTGATTTTAGTCAGAGTGTGGCAAAATTATGGTCACAATATAAACGCAAAGACCAAATGGGTAAAGGTAAGGGCTGCTTCAAATGTGGTTCTACAGATCATGTTGCCAAAGATTGCACTGAGGATGCTAAGAATAACCAAATGACGAAATACATCTTGAAGGACGACAATACCCAACGTGGTGGGGAGAATTCAAGATATGAAATGGTTTTTGATGGAGATGACGCAGGGAGCGCAAGACAAGGAAAGGGACACAGGAGGCATGACAAGGATGATCCAATAGAGAGAGAAAGGGATCACAGGGATGAGGAGATGGTAGGCTCCAATGACAGAGATAGGTATGGTGATAGAAACAAAGGACGATATGAAAGAGGTATGAAAGATGTGGATTCCCACGCTGAGAGGAAAGATAGAGATAAGCATATGGAGAGACATAGAGGCGATGATGGTTATAGCCGGAAAGGTGATCGAGACTCTCGGAAGAGAAATGAGGATAGTAATTTGGAAAGACTGACTAGGGCTGATTATAGGAGGAAGACAGATTCTAGCCATGTGGAGAGAAGGGATGACAAGGAGTATAGCAGAGATAGAGAGAAGAGAAAGAGGGATGGTTCAGTTGAAGATGATCATGAAGGCAGTAGGAGAATGGATGACAGAGGTCATAGGACAAAGCAGGAAGAGCGAGGCAGGCAAGACCGGAAAAATGAAGATTACAGACGGCAAAGAGAAGAACGGTGCCGAAGAAGAGACATGGAATTCAATGATGATCGACATAAGAGACATCATAGTGACAGGAGATGA 1746 0.4227 MSVLIVTSLGDIVVDLFTDKCPLTSKNFLKLCKIKYYNGCLFHTIQKDFTAQTGDPTGIGSSGDSIYKFLYGDQARFFSDEIHIDLKHSKTGTVAMASAGENLNASQFYITLRDNLDYLDGKHTVFGEVAEGLDTLTRINEAYVDENGRPYKNIRIKHTYILDDPFDDPPQITELIPEASPEGKPKDEIVDEVRLEDDWVPMDEQIDPAELEEVIRTKEAHSRAVVLESIGDIPDAEIKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVVSAEIIRDHKTGDSLCYAFIEFENKPACEQAYFKMDNALIDDRRIHVDFSQSVAKLWSQYKRKDQMGKGKGCFKCGSTDHVAKDCTEDAKNNQMTKYILKDDNTQRGGENSRYEMVFDGDDAGSARQGKGHRRHDKDDPIERERDHRDEEMVGSNDRDRYGDRNKGRYERGMKDVDSHAERKDRDKHMERHRGDDGYSRKGDRDSRKRNEDSNLERLTRADYRRKTDSSHVERRDDKEYSRDREKRKRDGSVEDDHEGSRRMDDRGHRTKQEERGRQDRKNEDYRRQREERCRRRDMEFNDDRHKRHHSDRR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0088 581 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 506 IPR035542 -
Enph13g0088 581 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 245 315 IPR000504 GO:0003723
Enph13g0088 581 MobiDBLite consensus disorder prediction 371 385 - -
Enph13g0088 581 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 159 IPR002130 GO:0000413|GO:0003755
Enph13g0088 581 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 161 IPR002130 GO:0000413|GO:0003755
Enph13g0088 581 SMART c2hcfinal6 340 356 IPR001878 GO:0003676|GO:0008270
Enph13g0088 581 ProSiteProfiles Zinc finger CCHC-type profile. 341 356 IPR001878 GO:0003676|GO:0008270
Enph13g0088 581 MobiDBLite consensus disorder prediction 368 581 - -
Enph13g0088 581 CDD cyclophilin_RRM 4 169 IPR035538 -
Enph13g0088 581 Gene3D - 1 172 IPR029000 -
Enph13g0088 581 FunFam Peptidyl-prolyl cis-trans isomerase 1 172 - -
Enph13g0088 581 FunFam Peptidyl-prolyl cis-trans isomerase 182 323 - -
Enph13g0088 581 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Enph13g0088 581 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Enph13g0088 581 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Enph13g0088 581 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Enph13g0088 581 Gene3D - 194 326 IPR012677 -
Enph13g0088 581 Pfam Zinc knuckle 340 356 IPR001878 GO:0003676|GO:0008270
Enph13g0088 581 CDD RRM_PPIL4 240 322 - -
Enph13g0088 581 SUPERFAMILY Cyclophilin-like 1 176 IPR029000 -
Enph13g0088 581 SMART rrm1_1 244 317 IPR000504 GO:0003723
Enph13g0088 581 Gene3D - 334 387 - -
Enph13g0088 581 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 243 321 IPR000504 GO:0003723
Enph13g0088 581 SUPERFAMILY RNA-binding domain, RBD 229 335 IPR035979 GO:0003676
Enph13g0088 581 MobiDBLite consensus disorder prediction 393 581 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0088 7 166 U-box Gene Family AT5G67530 39.375 1.20e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0088 K12735 - gmx:100776900 842.417