Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0029 ATGGCTGCAGTAGGCAACCCCAGAACCTGGATTCCATACGTGAACATTAAAGATTGTTCTCGAAGTTTTTGCAGTGTGTACTGTCCACAGTGGTGTTATATAGTGCTCCCTCCTCCTCCTCCTTCCTTGGATGTCTCTCAAGATGACGATTCTTCCCCAAATTTCTCTCCTCTCGTCATCGCCATAATCGGCATCTTGGCCAGTGCTTTTCTTCTGGTAAGCTACTACACCTTCATTTCCAAGTACTGTGGAAATAGAGAATCTTCAGACACAGAGGATCTTCACCCAAATGATGAGATTGAAGACAATCACAACCCTTCCCTGCACGAACCTTGGCATGTCTCCACCAGAGGACTAGATGAAGCTCTGATAAAGTCCATTACAGTCTGTAAGTACAAGAAAGGAGATGGGTTGGTCGGAGTCGCAGATTGCTCTGTTTGTCTCAGTGAGTTTCGTGAAGATGAACATATCAGACTGTTGCCTAAATGCAGCCACGCTTTTCACGTCCCGTGCATCGACCAATGGCTCGAATCTCACTCGAATTGCCCTCTCTGTCGTGCTCTTATCTTCACGTTAAATCCATCGGCTCCGGCCCCTCAACCGCCGCCTCCTGTGACGGAAGAATCATCGTCGGGGAATGAATCTTCACCGGGAATTCAGAATCCGAGTGAAGAAAACGATGGGGGTGGAAGTAGAAACAATGAGATAATGGGGGATGTGGAAGGAGGTCGGAAGCCTGCAATGAGAGCATTTAGCGATCTGGGTTTCATGAGGGGAAGGCATAGAGTGATTGAGATCAGAGACGAAGGAGAGGAAGACAGTGAAGAGATGAGAAGGTCGGTCTCGATGGATCATTCGGTAGAGATAGGGTCAAAGGAAGGAGGGACATCGAAGAGATGGGAAGGAGAAAGCAGCAAGGGAAGCAACAGGAGGAAGATGAAGCTGCATTGTGTGTTGAGTCCAATGGCGATGAAGAGATCGTTTTCCAGTGGAAGATTCTCGTTCTGCAGAAATGGCAGAGTAGGAAGGCAGGGGATCATCCCTGTCTAA 1050 0.4819 MAAVGNPRTWIPYVNIKDCSRSFCSVYCPQWCYIVLPPPPPSLDVSQDDDSSPNFSPLVIAIIGILASAFLLVSYYTFISKYCGNRESSDTEDLHPNDEIEDNHNPSLHEPWHVSTRGLDEALIKSITVCKYKKGDGLVGVADCSVCLSEFREDEHIRLLPKCSHAFHVPCIDQWLESHSNCPLCRALIFTLNPSAPAPQPPPPVTEESSSGNESSPGIQNPSEENDGGGSRNNEIMGDVEGGRKPAMRAFSDLGFMRGRHRVIEIRDEGEEDSEEMRRSVSMDHSVEIGSKEGGTSKRWEGESSKGSNRRKMKLHCVLSPMAMKRSFSSGRFSFCRNGRVGRQGIIPV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0029 349 PANTHER RING-H2 FINGER PROTEIN ATL16 42 289 IPR044600 GO:0016567|GO:0016740
Enph13g0029 349 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Enph13g0029 349 MobiDBLite consensus disorder prediction 88 111 - -
Enph13g0029 349 FunFam RING-H2 finger protein ATL54 119 192 - -
Enph13g0029 349 Pfam Ring finger domain 143 186 IPR001841 -
Enph13g0029 349 MobiDBLite consensus disorder prediction 196 243 - -
Enph13g0029 349 SMART ring_2 144 185 IPR001841 -
Enph13g0029 349 MobiDBLite consensus disorder prediction 88 108 - -
Enph13g0029 349 MobiDBLite consensus disorder prediction 207 230 - -
Enph13g0029 349 MobiDBLite consensus disorder prediction 267 310 - -
Enph13g0029 349 CDD RING-H2_EL5-like 143 186 - -
Enph13g0029 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 191 IPR013083 -
Enph13g0029 349 SUPERFAMILY RING/U-box 143 193 - -
Enph13g0029 349 MobiDBLite consensus disorder prediction 267 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0029 Enph-Chr13 3082604 3083653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0029 6 349 C3H Transcription Factor Family AT5G17600 41.755 8.24e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0029 - - gmx:100792267 400.593