Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0028 ATGGCTTCCGGGGAAGAGGCTCAGGCAGCTATAGATAAATTTGACTCTCATGAATTGTCTGGCAGGATAATAAGAGTGGAGCTTGCAAAGAGATTCAAGAAGCCTTCTCCTCCACGTCCTCCTCCAAGTCCCCCTGCTGGCGAGACAAGCAATAAAATTTATGCATCGAATCTTGCATGGAAAGCAAGATCTAGCCATCTCAGAGAATTCATCACGCAGAACTTCAAATCACCGGTTTCAGCCAGGGTAGTCTTTGACAGCCCTTCTGGAAGATCTGCAGGGTATGGATTTGTTTCTTTTGCTACAAAGGATGAAGCAGAGGCTGCCATTTCTGCTTTGGATGGGAAGGAATTAATGGGACGACCACTTCGTCTAAAAATCAGTCAAAGGACTGTTAAAGAATCTGGGGACGAGGAAGTGGAACAGCAAGGTTCTGATAATGAGCCGGAAGAGTCATAG 459 0.4597 MASGEEAQAAIDKFDSHELSGRIIRVELAKRFKKPSPPRPPPSPPAGETSNKIYASNLAWKARSSHLREFITQNFKSPVSARVVFDSPSGRSAGYGFVSFATKDEAEAAISALDGKELMGRPLRLKISQRTVKESGDEEVEQQGSDNEPEES 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0028 152 SMART rrm1_1 52 126 IPR000504 GO:0003723
Enph13g0028 152 SUPERFAMILY RNA-binding domain, RBD 2 42 IPR035979 GO:0003676
Enph13g0028 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 124 IPR000504 GO:0003723
Enph13g0028 152 PANTHER OS02G0815200 PROTEIN 1 130 - -
Enph13g0028 152 MobiDBLite consensus disorder prediction 30 51 - -
Enph13g0028 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 130 IPR000504 GO:0003723
Enph13g0028 152 Gene3D - 1 37 IPR012677 -
Enph13g0028 152 Gene3D - 49 125 IPR012677 -
Enph13g0028 152 MobiDBLite consensus disorder prediction 128 152 - -
Enph13g0028 152 SUPERFAMILY RNA-binding domain, RBD 33 132 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0028 Enph-Chr13 3073060 3077529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0028 53 149 Eukaryotic Initiation Factors Gene Family AT1G49760 36.082 2.17e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0028 - - gmx:100792275 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g0028 13 3073060 3077529 Enph13g0028 13 3073060 3077529 ECH