Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1399 ATGAACCAACTAGGTTTTCATCTTGTGATTCTGTATTTCATACTCTTCAGATTTTCCTGCAAAGCTCTGATTTCACCTGCTGCTCCTTCACAAGATGTTATCTCCAATTTCCAGCCAAGTCTTGCTGTTGTCATAGGAGTTCTCAGTCTCATGTTCACACTGACATTCATTCTTCTCATGTATGCTAAGTGCTGTAACAGAAGAGCTTCTGTTCATGGAGACCCAGAAAGTCAACCTTGGCTTAACAGAACAAGGTCAAGATTCTCAGGAATCGACAAGACTGTCATAGAATCACTTCCCTTCTTCAGATTCTCTTCCCTCAGAGGATCAAAGGAAGGCCTTGAATGTGCAGTTTGCTTATCCAAATTTGAAGACATTGAGATTCTCAGGCTGCTTCCTAAGTGTAAACATGCTTTTCACATTAATTGCATCGATTATTGGCTTGAAAAACATTCTAGTTGTCCTCTTTGTAGGAACAGGGTTGATCCTGAAGATCAGACCATTTTTACATATTCAAACAGCTTGAGGCTGCTTATCAATGGTGGGACAGAATTCGGAGAAGAATCCAACATAGAGCTTTTTGTTCAGAGAGAGGAACAAGAACAACAAAGTGGATCATCATCAAGATTCGATATTGGAAGCAGCTTTAGGAGAATCATAAAGGGTACTTCAAAAGACGAAGAATTTCCAATTCAGAAACAAGCTGCTTATGCTGATCACAAGAAGGTCTATCACAAGCACAAACACAAGATCAATGTGTCTGATTTTGTTCTGAAGAATCGATGGAGCAACGTGAGCTCCTCAGATCTCATGTTCTTGAACTCAGAGATGCTTGGTTCTACTTCAAGTGTAAGATTCAACAATTTGGAACCAAATGATGATCAGATTGTGATTACAACAGAAGAAGCAGAAAATGAGCAAGTCATGAACATCAAGGAGGAGATTGGGAGGAAGGTTTCGTTTGAGAGCAAAGTGAGTGGACTGAAGAACAATAAAAACTCTGTTTCAGATTCTGCAGGCAATTCCAGCCATACATCAAAGTATGTGAATCCAGATGAGAAAAGATCAGTATCAGACATCACTGCTGTCTCTAGGTTTGAAAACCTGGGCATGAAAAATGATACCCTTAAAGGTTCTTCTTCTTTGGTTGATGAGAATAATGTTATAGAAGAAAGAAGGAGGCAGATTTGGCTGCCAATTGCCAAAAGAACAGTTCAATGGTTTGTGAACAGAGAAAAAAGGTTTCAGCAATCTCTGAATGTATAG 1266 0.3942 MNQLGFHLVILYFILFRFSCKALISPAAPSQDVISNFQPSLAVVIGVLSLMFTLTFILLMYAKCCNRRASVHGDPESQPWLNRTRSRFSGIDKTVIESLPFFRFSSLRGSKEGLECAVCLSKFEDIEILRLLPKCKHAFHINCIDYWLEKHSSCPLCRNRVDPEDQTIFTYSNSLRLLINGGTEFGEESNIELFVQREEQEQQSGSSSRFDIGSSFRRIIKGTSKDEEFPIQKQAAYADHKKVYHKHKHKINVSDFVLKNRWSNVSSSDLMFLNSEMLGSTSSVRFNNLEPNDDQIVITTEEAENEQVMNIKEEIGRKVSFESKVSGLKNNKNSVSDSAGNSSHTSKYVNPDEKRSVSDITAVSRFENLGMKNDTLKGSSSLVDENNVIEERRRQIWLPIAKRTVQWFVNREKRFQQSLNV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1399 421 MobiDBLite consensus disorder prediction 330 347 - -
Enph12g1399 421 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 167 IPR013083 -
Enph12g1399 421 FunFam RING-H2 finger protein ATL43 91 165 - -
Enph12g1399 421 Pfam Ring finger domain 115 158 IPR001841 -
Enph12g1399 421 MobiDBLite consensus disorder prediction 330 354 - -
Enph12g1399 421 CDD RING-H2_EL5-like 115 158 - -
Enph12g1399 421 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 29 413 - -
Enph12g1399 421 SUPERFAMILY RING/U-box 95 164 - -
Enph12g1399 421 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Enph12g1399 421 SMART ring_2 116 157 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1399 Enph-Chr12 21491001 21492266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1399 6 416 C3H Transcription Factor Family AT4G28890 45.139 2.21e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1399 K10664 - gmx:100803207 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph12g1399 12 21491001 21492266 Enph12g1399 12 21491001 21492266 ECH