LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph12g1299	ATGTATGAAATTACCACAAACGATCTTGCTAATCCGCACTCCTGGTGTTTCATGTGTTGTTCGGAGAGTAGGCGCATGCTGGTTGCTTATTTGTTCGTATTACCTCACGATACTGTAGTGCTTATTATGTATGTGAATTCGATGACAATGGTGAGAGTTAGCGTCTTAAATGATGCTCTCAAGAGCATCTTCAACGCTGAAAAACGGGGAAAGCGACAGGTAATGGTTAGGCCTTCCTCAAAGGTGATCATCAAATTCCTTTTGGTGATGCAGAAGCATGGGTACATTGGAGATTTTGAGTTTGTTGATGATCACAGGGCTGGGAAAATTGTGATTGAATTGAATGGAAGACTAAATAAATGTGGAGTTATTAGTCCTCGATTTGATGTGGGTGTCAAGGATATTGAACCTTGGACTGCAAGGCTGCTTCCATCAAGACAGTTTGGTTATATTGTCTTGACTACCTCTGCTGGCATTATGGATCACGAAGAGGCCAGGAGAAAGAATGTCGGTGGTAAGGTGTTGGGGTTTTTTTACTAG	540	0.4204	MYEITTNDLANPHSWCFMCCSESRRMLVAYLFVLPHDTVVLIMYVNSMTMVRVSVLNDALKSIFNAEKRGKRQVMVRPSSKVIIKFLLVMQKHGYIGDFEFVDDHRAGKIVIELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY	179

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph12g1299	179	FunFam	40S ribosomal protein S15a	119	179	-	-
	Enph12g1299	179	Gene3D	-	119	179	-	-
	Enph12g1299	179	ProSitePatterns	Ribosomal protein S8 signature.	149	166	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Enph12g1299	179	FunFam	40S ribosomal protein S15a	50	118	-	-
	Enph12g1299	179	Gene3D	-	50	118	-	-
	Enph12g1299	179	Pfam	Ribosomal protein S8	56	179	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Enph12g1299	179	PANTHER	40S RIBOSOMAL PROTEIN S15A	50	178	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Enph12g1299	179	SUPERFAMILY	Ribosomal protein S8	53	179	IPR035987	GO:0003735\|GO:0005840\|GO:0006412
	Enph12g1299	179	Hamap	30S ribosomal protein S8 [rpsH].	51	179	IPR000630	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph12g1299	Enph-Chr12	19836208	19838592	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph12g1299	50	179	Cytoplasmic Ribosomal Protein Gene Family	AT5G59850	91.538	1.09e-88	254

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph12g1299	K02957		-	aof:109831666	255.758