Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Enph12g1259 | ATGCCTATAATTCGAAGCCTAATCCAGGATATAAGATCCAGGTCGCGCCGTGTGGTCCAGGACGGTTCTTCAATGGAGGAGCCTGTCACTGATGGCTTGAAGCAGAGTTCCTGGGCCCACATGCCTCAGGAGCTTCTCAGGGAGGTTTTGCTCCGAATTGAGCAGTCTGAGAGCTCTTGGCCACCGCGCAAGAGTGTGGTGGCGTGTGCTGGTGTGTGCCGGAGTTGGAGGGAGATCACCAAGGAGATCGTCAAGCCGCCTGAAGTTTCCGCCAAGATCACTTTTCCGATCTCTGTCAAGCAGCCTGGCCCTAGAGATCATCTTCTTCAGTGCTTTATAAAGCGCAACCGCTCCTCCCAAACATATTATTTGTTCCTCAGTTTAACTAATGATCAAATTTTCTGGGAACAAAGTTCACAATATTTGATGGCCAGCCACCACATGCAGGTGCAAAAAATTGCTAAAAGTCGCTCCACTAGGCTGGTGAATCTGAAGCAAGTTTCACCCAGGGTCCCTACTGGTAATTATCCAGTGGCCCACATTTCATATGAATTAAATGTGCTAGGCTCCAGGGGGCCTAGGAGAATGAATTGTGTCATGGATTCCATTCCTGCCTCTGCAATTGAACCGGGAGGGGTAGCCCCAACACAGACTGACTTTTCTCTGAGCAATATTGATGTGTTTCCTTCATTTTCATTTTTCCGATCAAAGTCAAATCGTATAGAAAAATCCGAATCTGGACTCCTGGGTGATAAAAAAGATGGGGTGCTAGTGTTGAAAAACAAATCTCCAAGGTGGCATGAACAGCTCCAATGCTGGTGCTTAAACTTCCATGGACGTGTGACAGTAGCTTCAGTAAAAAACTTTCAGCTGGTGGCATCCCCAGAGACTGGAGCAGCTGCTGGGCCAGAACATGAGAAGATTATCCTCCAGTTTGGTAAAGTTGGGAAGGATTTGTTTACGATGGATTACCGGTACCCCATCTCAGCATTTCAGGCTTTCGCAATCTGCCTCAGCAGCTTCGATACCAAGATCGCTTGTGAATGA | 1047 | 0.4776 | MPIIRSLIQDIRSRSRRVVQDGSSMEEPVTDGLKQSSWAHMPQELLREVLLRIEQSESSWPPRKSVVACAGVCRSWREITKEIVKPPEVSAKITFPISVKQPGPRDHLLQCFIKRNRSSQTYYLFLSLTNDQIFWEQSSQYLMASHHMQVQKIAKSRSTRLVNLKQVSPRVPTGNYPVAHISYELNVLGSRGPRRMNCVMDSIPASAIEPGGVAPTQTDFSLSNIDVFPSFSFFRSKSNRIEKSESGLLGDKKDGVLVLKNKSPRWHEQLQCWCLNFHGRVTVASVKNFQLVASPETGAAAGPEHEKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKIACE | 348 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Enph12g1259 | 348 | CDD | F-box_AtTLP-like | 38 | 82 | - | - | |
Enph12g1259 | 348 | ProSitePatterns | Tub family signature 1. | 277 | 290 | IPR018066 | - | |
Enph12g1259 | 348 | SUPERFAMILY | Tubby C-terminal domain-like | 87 | 348 | IPR025659 | - | |
Enph12g1259 | 348 | Gene3D | Tubby Protein; Chain A | 138 | 342 | IPR025659 | - | |
Enph12g1259 | 348 | Pfam | Tub family | 140 | 343 | IPR000007 | - | |
Enph12g1259 | 348 | Gene3D | - | 31 | 83 | - | - | |
Enph12g1259 | 348 | PRINTS | Tubby superfamily signature | 175 | 202 | IPR000007 | - | |
Enph12g1259 | 348 | PRINTS | Tubby superfamily signature | 259 | 276 | IPR000007 | - | |
Enph12g1259 | 348 | PRINTS | Tubby superfamily signature | 277 | 293 | IPR000007 | - | |
Enph12g1259 | 348 | PRINTS | Tubby superfamily signature | 326 | 348 | IPR000007 | - | |
Enph12g1259 | 348 | PRINTS | Tubby superfamily signature | 305 | 324 | IPR000007 | - | |
Enph12g1259 | 348 | PANTHER | TUBBY-RELATED | 165 | 346 | - | - | |
Enph12g1259 | 348 | Pfam | F-box domain | 38 | 84 | IPR001810 | GO:0005515 | |
Enph12g1259 | 348 | ProSitePatterns | Tub family signature 2. | 333 | 348 | IPR018066 | - | |
Enph12g1259 | 348 | SUPERFAMILY | F-box domain | 30 | 81 | IPR036047 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Enph12g1259 | Enph-Chr12 | 19421782 | 19426177 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Enph12g1259 | 12 | 348 | TUB Transcription Factor Family | AT2G47900 | 62.240 | 4.14e-157 | 445 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TUB | Enph12g1259 | Tub | 2e-70 | CL0395 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Enph12g1259 | K19600 | - | cave:132168101 | 522.702 |