Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1259 ATGCCTATAATTCGAAGCCTAATCCAGGATATAAGATCCAGGTCGCGCCGTGTGGTCCAGGACGGTTCTTCAATGGAGGAGCCTGTCACTGATGGCTTGAAGCAGAGTTCCTGGGCCCACATGCCTCAGGAGCTTCTCAGGGAGGTTTTGCTCCGAATTGAGCAGTCTGAGAGCTCTTGGCCACCGCGCAAGAGTGTGGTGGCGTGTGCTGGTGTGTGCCGGAGTTGGAGGGAGATCACCAAGGAGATCGTCAAGCCGCCTGAAGTTTCCGCCAAGATCACTTTTCCGATCTCTGTCAAGCAGCCTGGCCCTAGAGATCATCTTCTTCAGTGCTTTATAAAGCGCAACCGCTCCTCCCAAACATATTATTTGTTCCTCAGTTTAACTAATGATCAAATTTTCTGGGAACAAAGTTCACAATATTTGATGGCCAGCCACCACATGCAGGTGCAAAAAATTGCTAAAAGTCGCTCCACTAGGCTGGTGAATCTGAAGCAAGTTTCACCCAGGGTCCCTACTGGTAATTATCCAGTGGCCCACATTTCATATGAATTAAATGTGCTAGGCTCCAGGGGGCCTAGGAGAATGAATTGTGTCATGGATTCCATTCCTGCCTCTGCAATTGAACCGGGAGGGGTAGCCCCAACACAGACTGACTTTTCTCTGAGCAATATTGATGTGTTTCCTTCATTTTCATTTTTCCGATCAAAGTCAAATCGTATAGAAAAATCCGAATCTGGACTCCTGGGTGATAAAAAAGATGGGGTGCTAGTGTTGAAAAACAAATCTCCAAGGTGGCATGAACAGCTCCAATGCTGGTGCTTAAACTTCCATGGACGTGTGACAGTAGCTTCAGTAAAAAACTTTCAGCTGGTGGCATCCCCAGAGACTGGAGCAGCTGCTGGGCCAGAACATGAGAAGATTATCCTCCAGTTTGGTAAAGTTGGGAAGGATTTGTTTACGATGGATTACCGGTACCCCATCTCAGCATTTCAGGCTTTCGCAATCTGCCTCAGCAGCTTCGATACCAAGATCGCTTGTGAATGA 1047 0.4776 MPIIRSLIQDIRSRSRRVVQDGSSMEEPVTDGLKQSSWAHMPQELLREVLLRIEQSESSWPPRKSVVACAGVCRSWREITKEIVKPPEVSAKITFPISVKQPGPRDHLLQCFIKRNRSSQTYYLFLSLTNDQIFWEQSSQYLMASHHMQVQKIAKSRSTRLVNLKQVSPRVPTGNYPVAHISYELNVLGSRGPRRMNCVMDSIPASAIEPGGVAPTQTDFSLSNIDVFPSFSFFRSKSNRIEKSESGLLGDKKDGVLVLKNKSPRWHEQLQCWCLNFHGRVTVASVKNFQLVASPETGAAAGPEHEKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKIACE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1259 348 CDD F-box_AtTLP-like 38 82 - -
Enph12g1259 348 ProSitePatterns Tub family signature 1. 277 290 IPR018066 -
Enph12g1259 348 SUPERFAMILY Tubby C-terminal domain-like 87 348 IPR025659 -
Enph12g1259 348 Gene3D Tubby Protein; Chain A 138 342 IPR025659 -
Enph12g1259 348 Pfam Tub family 140 343 IPR000007 -
Enph12g1259 348 Gene3D - 31 83 - -
Enph12g1259 348 PRINTS Tubby superfamily signature 175 202 IPR000007 -
Enph12g1259 348 PRINTS Tubby superfamily signature 259 276 IPR000007 -
Enph12g1259 348 PRINTS Tubby superfamily signature 277 293 IPR000007 -
Enph12g1259 348 PRINTS Tubby superfamily signature 326 348 IPR000007 -
Enph12g1259 348 PRINTS Tubby superfamily signature 305 324 IPR000007 -
Enph12g1259 348 PANTHER TUBBY-RELATED 165 346 - -
Enph12g1259 348 Pfam F-box domain 38 84 IPR001810 GO:0005515
Enph12g1259 348 ProSitePatterns Tub family signature 2. 333 348 IPR018066 -
Enph12g1259 348 SUPERFAMILY F-box domain 30 81 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1259 Enph-Chr12 19421782 19426177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1259 12 348 TUB Transcription Factor Family AT2G47900 62.240 4.14e-157 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Enph12g1259 Tub 2e-70 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1259 K19600 - cave:132168101 522.702