Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1254 ATGGAAGGCTCTGCCAATCTACGTCTCCACTTCGGCAAGATGGGCTACGGGTGCAAGCATTATCGGAGAAGATGTATGATTCGAGCTCCTTGTTGCACTGAGATTTATTGGTGTCGTCATTGTCATAACGAAGATGCGAGCCTTTTGAGCAATATCTGTGATTGGCACGAACTTGTGCGCCATGATGTTCAACAAGTTGTTTGTGCAGTTTGTGATACAGAGCAACCGGTTGCTCAAGTTTGCGCAAATTGTGGCGTCATGATGGGAGAATATTTCTGCGGCATCTGCAAATTCTTCGATGATGATACGGGGAAACAGCAGTTTCATTGTCATGATTGTGGGATCTGTAGAGTTGGTGGTCGTGAGAATTATTATCACTGCAGGAAGTGTGGGTCCTGCTATTCAATTGGCCTGCGTGATAATCATTTATGTGTAGAGAACTCCATGAGGCATTACTGCCCAATATGTTATGAGGTGCACACTACTGTTATGAAATGTGGTCACACAATGCATCGCGAGTGTTGCCTAGAGATGATAAAGCGTGACAAGTATTGTTGCCCCATATGCTCCAAGTCAGTGATTGGCATGTCCAGTACGTGGAAGAGAATTGATGAAGTGATTGTGGGAACTGTCATTCCTGAAGATTACTGGGACAGGAAGGTTTGGATAGTCTGTAATGATTGCAACGACACAACAGAAGTTTACTTCCACTTCATAGGCCAAAAATGTGGTCATTGCAGATCATATAATACTCGTGCAATAGCTCCTCCTGTTCTTCCTCAATAA 786 0.4402 MEGSANLRLHFGKMGYGCKHYRRRCMIRAPCCTEIYWCRHCHNEDASLLSNICDWHELVRHDVQQVVCAVCDTEQPVAQVCANCGVMMGEYFCGICKFFDDDTGKQQFHCHDCGICRVGGRENYYHCRKCGSCYSIGLRDNHLCVENSMRHYCPICYEVHTTVMKCGHTMHRECCLEMIKRDKYCCPICSKSVIGMSSTWKRIDEVIVGTVIPEDYWDRKVWIVCNDCNDTTEVYFHFIGQKCGHCRSYNTRAIAPPVLPQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1254 261 SUPERFAMILY Zinc hairpin stack 89 146 IPR037275 -
Enph12g1254 261 Gene3D - 219 256 - -
Enph12g1254 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 218 IPR013083 -
Enph12g1254 261 ProSiteProfiles Zinc finger RING-type profile. 153 190 IPR001841 -
Enph12g1254 261 SUPERFAMILY CHY zinc finger-like 15 87 IPR037274 GO:0008270
Enph12g1254 261 Pfam CHY zinc finger 18 98 IPR008913 GO:0008270
Enph12g1254 261 SUPERFAMILY RING/U-box 152 195 - -
Enph12g1254 261 ProSiteProfiles Zinc finger CTCHY-type profile. 88 152 IPR017921 -
Enph12g1254 261 SMART ring_2 153 189 IPR001841 -
Enph12g1254 261 FunFam RING finger and CHY zinc finger domain-containing protein 1 218 260 - -
Enph12g1254 261 Pfam Zinc-ribbon 196 252 IPR039512 -
Enph12g1254 261 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 13 257 - -
Enph12g1254 261 ProSiteProfiles Zinc finger CHY-type profile. 11 86 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1254 Enph-Chr12 19383384 19387034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1254 13 260 C2H2 Transcription Factor Family AT3G18290 36.680 5.45e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1254 K10144 - qsa:O6P43_021701 484.567