Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1242 ATGGAAGGCTCTGCCAATCTACGTCTCCACTTCGGCAAGATGGGCTACGGGTGCAAGCATTATCGGAGAAGATGTATGATTCGAGCTCCTTGTTGCACTGAGATTTATTGGTGTCGTCATTGTCATAACGAAGATGCGAGCCTTTTGAGCAATATCTGTGATTGGCACGAACTTGTGCGCCATGATGTTCAACAAGTTGTTTGTGCAGTTTGTGATACAGAGCAACCGGTTGCTCAAGTTTGCGCAAATTGTGGCGTCATGATGGGAGAATATTTCTGCGGCATCTGCAAATTCTTCGATGATGATACGGGGAAACAGCAGTTTCATTGTCATGATTGTGGGATCTGTAGAGTTGGTGGTCGTGAGAATTATTATCACTGCAGGAAGTGTGGGTCCTGCTATTCAATTGGCCTGCGTGATAATCATTTATGTGTAGAGAACTCCATGAGGCATTACTGCCCAATATGTTATGAGTACCTTTTTGATTCATTGAAAGACACTACTGTTATGAAATGTGGTCACACAATGCATCGCGAGTGTTGCCTAGAGATGATAAAGCGTGACAAGTATTGTTGCCCCATATGCTCCAAGTCAGTGATTGACATGTCCAGTACGTGGAAGAGAATTGATGAAGTGATTGTGGGAACTGTCATTCCTGAAGATTACCAGGACAGGAAGGTTTGGATAGTCTGTAATGATTGCAACGACACAACAGAAGTTTACTTCCACTTCATAGGTCAAAAATGTGGTCATTGCAGATCATATAATACTCGTGCAATAGCTCCTCCTGTTCTTCCTCAATGA 804 0.4328 MEGSANLRLHFGKMGYGCKHYRRRCMIRAPCCTEIYWCRHCHNEDASLLSNICDWHELVRHDVQQVVCAVCDTEQPVAQVCANCGVMMGEYFCGICKFFDDDTGKQQFHCHDCGICRVGGRENYYHCRKCGSCYSIGLRDNHLCVENSMRHYCPICYEYLFDSLKDTTVMKCGHTMHRECCLEMIKRDKYCCPICSKSVIDMSSTWKRIDEVIVGTVIPEDYQDRKVWIVCNDCNDTTEVYFHFIGQKCGHCRSYNTRAIAPPVLPQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1242 267 ProSiteProfiles Zinc finger RING-type profile. 153 196 IPR001841 -
Enph12g1242 267 Pfam CHY zinc finger 18 98 IPR008913 GO:0008270
Enph12g1242 267 Pfam RING-type zinc-finger 153 193 IPR027370 -
Enph12g1242 267 SUPERFAMILY RING/U-box 152 202 - -
Enph12g1242 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 225 IPR013083 -
Enph12g1242 267 SUPERFAMILY CHY zinc finger-like 15 87 IPR037274 GO:0008270
Enph12g1242 267 FunFam RING finger and CHY zinc finger domain-containing protein 1 224 266 - -
Enph12g1242 267 Pfam Zinc-ribbon 200 258 IPR039512 -
Enph12g1242 267 SUPERFAMILY Zinc hairpin stack 89 146 IPR037275 -
Enph12g1242 267 ProSiteProfiles Zinc finger CTCHY-type profile. 88 152 IPR017921 -
Enph12g1242 267 Gene3D - 226 262 - -
Enph12g1242 267 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 13 263 - -
Enph12g1242 267 SMART ring_2 153 195 IPR001841 -
Enph12g1242 267 ProSiteProfiles Zinc finger CHY-type profile. 11 86 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1242 Enph-Chr12 19211854 19215401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1242 13 266 C2H2 Transcription Factor Family AT3G18290 37.838 1.44e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1242 K10144 - qsa:O6P43_021701 512.301