Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1240 ATGGCGAGGCCGTCGAAGCCCCAGACGTCTTCCGATGAAGCCATGTCGAACGGCTCCAATTCCTCCGAGGACGAGCGTGTCAACGAGCAGATCAACGACGAAGAGGACGAAGAGGAGTTGGAAGCTGTGGCTCGCTCTGCTAGCTCCGACGATGATGAAGCTGGTGATGGCGATGCGCCGGATTCTGATGACGATGCAGCAGCCACTGAAGACGCTGACGAGGAGGAACAGGATGAGGGAAATGTTGATCCAGAAATTAGCAAGCGTGAGAAGGCCAGATTAAGAGAAATGCAGAAATTGAAGAAACAAAAGATTCAGGAGATGTTGGATAAGCAAAATGCTGCCATTGGCGCCGACATGAGGAAAGGGCGCTTGAAGTATCTCCTACAGCAAACTGAGTTGTTTGCTCATTTCGCTAAAAGGGGTCGTCATGCATCTAAAGTAACTGAAGAAGAGGAAGATGAAGAATACCTCAAAGAAGAAGAAGATGGTTTAGCAGGAAATACACGGCTGGTGACACAACCATCATGTATCCAAGGAAAGATGAGGGATTACCAACTTGCTGGTCTAAACTGGCTTATAAGATTGTATGAGAATGGTATCAATGGGATTCTGGCAGATGAAATGGGGTTGGGTAAAACATTGCAAACTATCTCCTTATTGGGTTATTTGCATGAGTTCAGAGGAATCAAAGGTCCTCATATGGTGGTTGCTCCAAAATCTACTCTTGGAAATTGGATGAATGAAATTCGACGCTTTTGTCCTGTTCTGCATGCAATAAAGTTTCTTGGCAATCCTGATGAAAGGAGACACATTAGAGAGGAATTATTGGTTGCCGGGAAGTTTGATGTATGTGTTACTAGTTTTGAGATGGCAATCAAGGAGAAGACTGCCCTGCGTCGTTTTAGCTGGCGCTACATAATTATTGATGAAGCCCATCGAATCAAGAATGAGAATTCTTTACTTTCTAAAACAATGAGACTTTACAATACAAACTATCGGCTTCTTATCACTGGTACACCACTTCAGAACAATCTCCATGAACTCTGGTCTCTTCTCAATTTTCTTCTTCCAGAAATTTTTAGTTCTTCTGAAACTTTTGATGAGTGGTTTCAAATCTCTGGTGAAAATGACCAGCAAGAGGTTGTTCAACAACTGCACAAGGTCCTTCGTCCTTTTCTCCTTCGAAGGTTGAAGTCAGATGTCGAGAAGGGTTTGCCACCAAAAAAAGAAACCATTCTCAAAGTAGGAATGTCACAGATGCAGAAACAATATTACAAGGCCTTATTGCAGAAGGATCTCGAGGTTGTCAATGCTGGTGGAGAAAGAAAACGTCTCCTAAACATAGCAATGCAACTTCGTAAATGTTGTAATCATCCATATCTTTTCCAAGGTGCTGAACCTGGTCCTCCCTATACAACTGGAGATCATCTTATTACAAATGCTGAGCGAGACTCCAGGGTGCTTATATTTTCACAGATGACAAGGCTACTAGACATACTTGAAGATTACTTGATGTTTCGTGGATATCAATATTGTCGTATTGATGGTAATACTGGTGGAGATGATCGTGATGCTTCTATTGAAGCTTTCAATAAACCTGGAAGTGAAAAATTTGTCTTCTTGTTATCCACTCGGGCTGGAGGTCTTGGCATTAATCTTGCAACTGCTGATGTTGTCATTCTATATGACAGAACCCCCAAGTTGACTTGCAGGCTCAGGACCGGGCTCATAGGATTGGTCAAAAGAAAGAAGTTCAAGTTTTCCGTTTCTGCACTGAGTATACCATTGAGGAAAAAGTCATTGAAAGGGCTTACAAAAAAGCTTGCGCTTGATGCATTGGTGATTCAGCAAGGCGATTAG 1863 0.4283 MARPSKPQTSSDEAMSNGSNSSEDERVNEQINDEEDEEELEAVARSASSDDDEAGDGDAPDSDDDAAATEDADEEEQDEGNVDPEISKREKARLREMQKLKKQKIQEMLDKQNAAIGADMRKGRLKYLLQQTELFAHFAKRGRHASKVTEEEEDEEYLKEEEDGLAGNTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIKGPHMVVAPKSTLGNWMNEIRRFCPVLHAIKFLGNPDERRHIREELLVAGKFDVCVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSSETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDRTPKLTCRLRTGLIGLVKRKKFKFSVSALSIPLRKKSLKGLTKKLALDALVIQQGD 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1240 620 SMART helicmild6 499 576 IPR001650 -
Enph12g1240 620 CDD SF2_C_SNF 476 565 - -
Enph12g1240 620 SMART ultradead3 178 370 IPR014001 -
Enph12g1240 620 Gene3D - 407 565 IPR027417 -
Enph12g1240 620 PANTHER SNF2/RAD54 HELICASE FAMILY 11 566 - -
Enph12g1240 620 Pfam SNF2-related domain 194 462 IPR000330 GO:0005524|GO:0140658
Enph12g1240 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 397 IPR027417 -
Enph12g1240 620 CDD DEXHc_SMARCA1_SMARCA5 179 399 IPR044754 GO:0005524
Enph12g1240 620 Gene3D - 175 406 IPR038718 -
Enph12g1240 620 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 474 620 IPR001650 -
Enph12g1240 620 MobiDBLite consensus disorder prediction 53 81 - -
Enph12g1240 620 Coils Coil 87 107 - -
Enph12g1240 620 MobiDBLite consensus disorder prediction 1 90 - -
Enph12g1240 620 FunFam Chromatin-remodeling complex ATPase 183 398 - -
Enph12g1240 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 566 IPR027417 -
Enph12g1240 620 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 194 359 IPR014001 -
Enph12g1240 620 MobiDBLite consensus disorder prediction 1 25 - -
Enph12g1240 620 Pfam Helicase conserved C-terminal domain 478 566 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1240 Enph-Chr12 19194464 19199166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1240 486 564 RAD5 or RAD16-like Gene Family AT5G22750 35.443 6.56e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph12g1240 SNF2_N 1.4e-72 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1240 K11654 - zju:107426915 954.896