LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph12g1232	ATGTTTTTCCTGAAGGGTTTTACAAGAACCCAGCCAATTCGGTCGCTCTATAATCTTCTTCAACATGTTTCATCATCAACCTTCGCTCACTCGTACAGCACCGCCGCCGTTTCACCCACTTCAGAGAAAATGTCTTTTACAGTGAGTTACCTCATTAGCAAATGTGGGTTCTCCCTTAAAGACGCATCGGCGATTTGCAATCGCGTCTCCCTCAAGTCAGCGGAAAACCCAGACTTCGTTCTGACCCTTTTCAGAAGCTGTGGTTTCAAGAATCCCCAGATTCGCGAAATCCTCAAGAGGGCGCCGAGATTGCTTCTGAGTAATCCTGAGGAGACCATTTGGCGTAAGCTTGATTTTTTACTTTCCAAAGGTGCGTCTTGCTCTCAACTTGTCAACATTGTGACCAGAAACCCTCGATTCTTACTCAGAAGCTTAGACAATCACTCAATCCCTTGTTATAATCTTGTTAAGGGGTTTGTTGGATCTGATCTAAGGACTATCACATCAATCGATCGTGGTCCTATAATAATTTGTTCTGATTACCTGGAATCCAACATTCAACTCTTGCTTGACGTTGGTGTGCCCAAATCTGTCATTGCTAGATCGCTTTATGCATGGCCTAACTTGTTTACTATGAATTTAGATAAATTTAGAGCGGCAATTGAAGGAGTGAAGGAAAGAGGTCTTGACCCTTCTAAATCAAAATTCATTCCTGCTTTGTATGCGACAAATAAGTTAAGCAAATCCATTTGGGATAGTAAGGTGGAGTTGTATAAGAATTGGGGCTGGTCTGATGAAGAGGTTAATAAAGCGTTTGTTCTGTCTCCTTATTGTATGCTAAAATCTGTATCTAAGATTAAGGCAGTGATGGAGTTTTTTGTCAATGACATGGGTTGGAACTCTAGCTTGCTTGCCAATAATCCCATGTTTATTGCCATGAGTTTGGAGAAAAGAATCGTTCCAAGGTCTTATGTCTTGCGAAATCTTCATTCAAGAGGTTTAATTAGGAAAGCTTGA	1017	0.413	MFFLKGFTRTQPIRSLYNLLQHVSSSTFAHSYSTAAVSPTSEKMSFTVSYLISKCGFSLKDASAICNRVSLKSAENPDFVLTLFRSCGFKNPQIREILKRAPRLLLSNPEETIWRKLDFLLSKGASCSQLVNIVTRNPRFLLRSLDNHSIPCYNLVKGFVGSDLRTITSIDRGPIIICSDYLESNIQLLLDVGVPKSVIARSLYAWPNLFTMNLDKFRAAIEGVKERGLDPSKSKFIPALYATNKLSKSIWDSKVELYKNWGWSDEEVNKAFVLSPYCMLKSVSKIKAVMEFFVNDMGWNSSLLANNPMFIAMSLEKRIVPRSYVLRNLHSRGLIRKA	338

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph12g1232	338	FunFam	Mitochondrial transcription termination factor-like	145	338	-	-
	Enph12g1232	338	Gene3D	Transcription termination factor 3, mitochondrial	158	338	IPR038538	-
	Enph12g1232	338	PANTHER	CGI-12 PROTEIN-RELATED	44	334	IPR003690	GO:0003690\|GO:0006355
	Enph12g1232	338	Pfam	mTERF	182	335	IPR003690	GO:0003690\|GO:0006355
	Enph12g1232	338	Pfam	mTERF	81	216	IPR003690	GO:0003690\|GO:0006355
	Enph12g1232	338	SMART	mt_12	269	300	IPR003690	GO:0003690\|GO:0006355
	Enph12g1232	338	SMART	mt_12	200	230	IPR003690	GO:0003690\|GO:0006355
	Enph12g1232	338	SMART	mt_12	301	335	IPR003690	GO:0003690\|GO:0006355
	Enph12g1232	338	SMART	mt_12	131	162	IPR003690	GO:0003690\|GO:0006355
	Enph12g1232	338	SMART	mt_12	95	126	IPR003690	GO:0003690\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph12g1232	Enph-Chr12	19121752	19124223	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Enph12g1232		mTERF	5.6e-18	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph12g1232	K15031		-	vvi:100252802	259.996