Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph12g1213 | ATGTGGCAAAATCAACCCCATAAATCTTCTTCATCTTCTTCTTCTTCTTCTTCCTGCTTAAGAGATTCTATCATGGCTCTTGAAGCTGATATTCAACATGCCAATACCCTGGCAGCATCAGTTGGAGGAGATAATGGAGGGGACCATATTCAGATGAAGCTATCATACAGTCCTTTTGCTCCTTTATTCTTATATTTGATCCAATGGTTGGATTTCACTTGTACTGATTCTTTACCCACTTCTCTTGGTTTATTTCACATCCTCATTTACAAGGTGTACGGTGACGGAATACCCTCCTTATCCTCCAAAGAAAGAAATGCCTCTCTTAGGGATTTCTATGGTGTAATATACCCATGGCTGAGGCTACTTGAAGGAGAAATGAGAAGCAATTGCAGAGAAGGTGTGAAGAGAGAGAAAAGAGAATATAGAGAGGAAGAAGAATGTGAATGTGGGATCTGCATGGAAATGAGCATGATTATGGTTCTTCCTAATTGTGGCCATTCCTTGTGCATTACCTGCTTCCACCACTGGAATGAGAGATCAGAGTCATGCCCATTTTGCAGAGGAAGCTTGAAGAGGGTGAACTCAACAGATCTATGGGTTGTGATAGACGACAATGAAGTGATAGACAGAGTCACACTGGCCAGAGACAACCTAAGACGCTTCTATCTCTACCTTCAATCTCTGCCTCTCCTGTCCGAGGATGCTCATGTCTTTGTCTATAACTACATGCTCTGA | 738 | 0.4214 | MWQNQPHKSSSSSSSSSSCLRDSIMALEADIQHANTLAASVGGDNGGDHIQMKLSYSPFAPLFLYLIQWLDFTCTDSLPTSLGLFHILIYKVYGDGIPSLSSKERNASLRDFYGVIYPWLRLLEGEMRSNCREGVKREKREYREEEECECGICMEMSMIMVLPNCGHSLCITCFHHWNERSESCPFCRGSLKRVNSTDLWVVIDDNEVIDRVTLARDNLRRFYLYLQSLPLLSEDAHVFVYNYML | 245 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph12g1213 | 245 | SUPERFAMILY | RING/U-box | 137 | 193 | - | - | |
| Enph12g1213 | 245 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 217 | IPR013083 | - | |
| Enph12g1213 | 245 | ProSiteProfiles | Zinc finger RING-type profile. | 150 | 188 | IPR001841 | - | |
| Enph12g1213 | 245 | Pfam | Zinc finger, C3HC4 type (RING finger) | 147 | 193 | - | - | |
| Enph12g1213 | 245 | PANTHER | RING FINGER PROTEIN 41, 151 | 20 | 241 | - | - | |
| Enph12g1213 | 245 | SMART | ring_2 | 150 | 187 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Enph12g1213 | Enph-Chr12 | 18913133 | 18919154 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Enph12g1213 | 139 | 191 | C3H Transcription Factor Family | AT4G23450 | 42.857 | 3.15e-06 | 44.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph12g1213 | - | - | pcin:129293983 | 347.821 |