Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1188 ATGATGGATGTTTTGGAGGTTGAAGAAACTCTGTTCTCAGCAAGTGATGCCAAGTTACATGGAGAATTGTGCAAGGCCCTTTCAGCAACATATTGCAAAATATTATCAATATTCCCATCTTTGGAAGCAGCTAGGCCTAGGAGCAAATCTGGGATTCAGGCACTTTGTTCATTGCATGTGGCATTAGAGAAGGCCAAAAATGTCTTTCAGCATTGCTCAGAATGTAGTAAGCTTTATTTGGCTATAACTGGGGATTCTGTGCTTCTAAAATTTGAGAAGGCTAAATGTGCTCTCGAGAATAGTCTTAAACGAGTGGAAGATATTGTTCCACAATCTATTGGATGTCAGATTCAAGAGATTGTGAGTGAACTTGCAAGTATGGAATTGGCACTTGACCCAATGGAGAAGCAAATTGGTGATAGTTTAATTGCATTGCTCCAGCAGGGGAGAAAGTTTAATGACTCTACTGACAGCAGTGAGCTGGAATGTTTTCACCAGGCTGCTACTAGACTTGGAATCACATCTTCTAGAGCAGCTCTTACTGAAAGAAGAGCTCTCAAAAAACATATTGAAAGAGCTCGAGCTGAAGAAGACAAGCGGAAGGAATCAATTGTTGCATATCTCTTGCACCTCATGAGGAAATACTCAAAGTTATTTAGAAGTGAGTTTTCAGATGATAACGATTCTCAGGGTTCTACTCCTTGTTCTCCCACTGTTCTGGGCTCTATTGAGGATGGTCTTGCTGGTGGTCATTACCAGGCCTTTGACAGACAGCTCTCAAAACTTAGTTCTTTTAATTTTAAGCCGAATAATAGAAAATCAGGGCAAATGCCCCTTCCACCTGAGGAGTTAAGGTGCCCAATATCTCTGCAACTTATGTATGATCCTGTCATAATTGCTTCTGGGCAAACTTATGAGAGGGTTTGCATAGAGAAATGGTTCTGTGATGGGCACAACACCTGTCCAAAGACTCAACAGAAACTTGCACATCTATCATTGACTCCTAATTATTGTGTTAAGGGTCTTGTTGCTAGTTGGTGTGAGCAAAATGGAGTTCCTATTCCTGATGGCCCTCCCGAATCTCTTGACTTTAACTACTGGAGACTAGCATTATCTGAGTCTGAATCAACAAATTCAAAATCTGTTAACAGTGTCAACTCTTGTAAATTGAAGGGTGTCAAAGTGGTTCCTATAGAAGAGACTGGTGTCTCACATGAAGCTGGAGAAAACGGAACTGAAAGTGTGTCTGCACAAGAGGAAGATACTGACCAATATCTTAGTTTTCTGAAAGTCTTGACTGAAGGGAACAGTTGGAAAAGGAAATTTAAAGTGGTAGAACGATTAAGGCTATTGCTGAGGGACGATGAAGAAGCCAGGATTTTTATGGGTGCCAATGGGTTTGTTGAAGCACTTTTGCAGTTTCTGCAGTCAGCAGTGTGCGAAGGGAATGTGGCAGCTCAAGAAAGTGGAGCAATGGCTCTCTTCAACCTTGCTGTGAATAACAATAGAAATAAGGAAATTATGTTAGCAGAAGGAATATTATCGCTGTTGAAGGAAATGATCTCTAATTCCAACTCTTATAGCTGTGCAACTGCCCTCTATCTGAATCTCTCATGCCTTGAAGAAGCCAAGCGTATGATTGGCATGAGTCAGGCTGTTCAGTTCCTCATTCAGCTCTTCTGTCAACCTAACATTGATGTCCAGTGCAAGCAAGATTCCCTTCATGCACTGTTTAATCTATCCACTGTCCCTTCCAATATTCCAAACCTCCTTTCGTCAGGCATCATCGGCAGCCTTCAATCCCTCCTTGCAGGCCAGGGTGATTGCACGTGGACGGAGAAATGCGTAGCTATTTTGATCAATTTGGCTTCTTCTCAGTTGGGAAAGGAGGGAATGATATCTTCTCCTGGACTCATAGGCGCGTTGGCTACCATTTTGGACACTGGTGAGCTCGTAGAGCAAGAGCAAGCTCTCACTTGTGTATTACTTTTATGCAACGGTAATGAAATATGTAGCCAAATGGTTCTGCAAGAAGGGGTAATACCAGCATTGGTGTCATTATCAGTGAATGGGACTTTAAGAGGAAGAGAGAAGGCTCAGAAACTCTTGATGCTGTTCCGAGAGCAGCGACAACGAGACCATTCACCTCCTAAGACTCACCAGTTCCCTCCTGAAAATAGTGATGTATTGATGTCACCTCCCGAGACAAAACCGCAATGCAAGTCTATGTCTAGAAAAAAAATGGGGAGAAAGCTTAGCTTTTTATGGAAAAACAAGAGCTATTCGGTTTACCAATGTTAG 2301 0.422 MMDVLEVEETLFSASDAKLHGELCKALSATYCKILSIFPSLEAARPRSKSGIQALCSLHVALEKAKNVFQHCSECSKLYLAITGDSVLLKFEKAKCALENSLKRVEDIVPQSIGCQIQEIVSELASMELALDPMEKQIGDSLIALLQQGRKFNDSTDSSELECFHQAATRLGITSSRAALTERRALKKHIERARAEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTVLGSIEDGLAGGHYQAFDRQLSKLSSFNFKPNNRKSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFCDGHNTCPKTQQKLAHLSLTPNYCVKGLVASWCEQNGVPIPDGPPESLDFNYWRLALSESESTNSKSVNSVNSCKLKGVKVVPIEETGVSHEAGENGTESVSAQEEDTDQYLSFLKVLTEGNSWKRKFKVVERLRLLLRDDEEARIFMGANGFVEALLQFLQSAVCEGNVAAQESGAMALFNLAVNNNRNKEIMLAEGILSLLKEMISNSNSYSCATALYLNLSCLEEAKRMIGMSQAVQFLIQLFCQPNIDVQCKQDSLHALFNLSTVPSNIPNLLSSGIIGSLQSLLAGQGDCTWTEKCVAILINLASSQLGKEGMISSPGLIGALATILDTGELVEQEQALTCVLLLCNGNEICSQMVLQEGVIPALVSLSVNGTLRGREKAQKLLMLFREQRQRDHSPPKTHQFPPENSDVLMSPPETKPQCKSMSRKKMGRKLSFLWKNKSYSVYQC 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1188 766 Gene3D - 414 760 IPR011989 -
Enph12g1188 766 PANTHER U BOX DOMAIN-CONTAINING 24 711 - -
Enph12g1188 766 SMART Ubox_2 283 346 IPR003613 GO:0004842|GO:0016567
Enph12g1188 766 Coils Coil 176 196 - -
Enph12g1188 766 SUPERFAMILY RING/U-box 278 356 - -
Enph12g1188 766 FunFam RING-type E3 ubiquitin transferase 279 353 - -
Enph12g1188 766 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842|GO:0016567
Enph12g1188 766 SMART arm_5 540 582 IPR000225 GO:0005515
Enph12g1188 766 SMART arm_5 455 499 IPR000225 GO:0005515
Enph12g1188 766 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 353 IPR013083 -
Enph12g1188 766 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 466 512 IPR000225 GO:0005515
Enph12g1188 766 MobiDBLite consensus disorder prediction 709 743 - -
Enph12g1188 766 Pfam U-box domain 281 350 IPR003613 GO:0004842|GO:0016567
Enph12g1188 766 CDD RING-Ubox_PUB 281 333 IPR045210 -
Enph12g1188 766 SUPERFAMILY ARM repeat 428 708 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1188 Enph-Chr12 18722738 18728941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1188 2 765 U-box Gene Family AT1G24330 65.854 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1188 - - gmx:100804344 1196.8