Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1185 ATGGTGAAGTATTCTAGAGAGCCTGACAATCCTACTAAGTCCTGCAAGGCTAGAGGCTCCGACCTTAGGGTTCATTTCAAGAATACCAGGGAGACTGCCTTTGCCATCAGAAAGTTGCCCATGGCGAAGGCTAAGAGGTACTTGGAGGATGTTCTGGCCCACAAACAAGCCATTCCATTCCGAAGGTTCTGTGGTGGAGTTGGGAGGACAGCCCAGGCTAAGAATAGACATTCTAACGGGCAAGGGCGCTGGCCTGTCAAATCAGCTAAATTCATTCTAGACCTGCTTAAGAATGCTGAGAGTAATGCTGAAGTGAAAGGATTGGATGTCGATGCCCTCTACATTTCTCATATCCAAGTTAATCAAGCACAGAAGCAAAGACGCCGCACCTACAGAGCACACGGAAGAATAAATCCTTACATGTCATCTCCTTGCCATATTGAGCTTATATTATCTGAGAAGGAAGAACCTGTCAAGAAGGAGGTGAGAATTGTTCGTTAA 501 0.4611 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPMAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEVRIVR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1185 166 Hamap 50S ribosomal protein L22 [rplV]. 2 154 IPR005721 GO:0003735|GO:0006412|GO:0015934
Enph12g1185 166 FunFam 60S ribosomal protein L17 1 165 - -
Enph12g1185 166 PANTHER 60S RIBOSOMAL PROTEIN L17 1 161 IPR005721 GO:0003735|GO:0006412|GO:0015934
Enph12g1185 166 CDD Ribosomal_L22 15 151 IPR001063 GO:0003735|GO:0005840|GO:0006412
Enph12g1185 166 ProSitePatterns Ribosomal protein L22 signature. 127 151 IPR018260 GO:0003735|GO:0005840|GO:0006412
Enph12g1185 166 Gene3D Ribosomal protein L22/L17 1 165 IPR036394 GO:0003735|GO:0005840|GO:0006412
Enph12g1185 166 NCBIfam 50S ribosomal protein L22 4 154 IPR005721 GO:0003735|GO:0006412|GO:0015934
Enph12g1185 166 Pfam Ribosomal protein L22p/L17e 17 152 IPR001063 GO:0003735|GO:0005840|GO:0006412
Enph12g1185 166 SUPERFAMILY Ribosomal protein L22 1 154 IPR036394 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1185 Enph-Chr12 18667984 18672455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1185 1 161 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 90.683 1.37e-110 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1185 K02880 - cpap:110825807 325.865