Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1169 ATGCCGGTGAATCTCACGCCGAACGCTATCGCGGCGATTATCGCCGGCGACGTGAACTCAAAGCCCCTGGTCCAGGTCCTGGACATCAAATTGATTTCCAATAATACGCAGCAGGAGAGGTACCGGCTTCTGCTTTCCGATTCCGTTTCTACTCAGCATGCTATGCTCGTGACTCAGCTCAACGACCGAGTTAGAACCGGACGAGTCAAGAAAGGTTCCGTCGTTCAGTTGATTGAGTACATTTGCAGTCATATTCAGAACCGCAAGATCATTGTAGTCCTCAACATGGAAACTATAATTCCAGATTGTGAGATTATCGGGAAGCCAAACACGTATGTGGATTCTAATTCAACAGCTCAGAAGGCATTGACTAATAACAGTATGCAAAACTTACACATGATTAATAACAATCGTCTATCTGCTCAAAATTCAAGTCTTGATGAGCAGAATTTCAAGCCAACTATTCAACCTCCATTCCAGCCTCCTCCAGTTTACAAAAGCCATGGTGCAATTGTGAAGAATGAGGCACCAGCACGGATCATTCCTATTGCTGCTTTAAATCCTTATCAAGGTCGGTGGGCTATCAAGGCAAGAGTAACTGCAAAAGGGGATCTCCGTCGCTATAATAATGCTCGTGGAGATGGAAAAGTTTTCTCTTTCGATCTCCTTGATTCTGATGGAGGTGAAATACGAGCAACTTGCTTCAATGCTGTTGTTGATCGCTTTTATGATGCAATTGAGGTTGGTAGAGTTTACTTGATATCCAAAGGTAGCCTAAAACCTACGCAGAAGAACTTCAATCATTTGAAGAATGACTGGGAAATTTTTCTGGACTGGAATTCAACTATGGAGCTTTGCCCTGATGAAGATGCTTCAATACCCAGACAGCAATTCTCCTTTAGGCCTATTAGTGATATTGAGAGCGTTGATAGTAACTGCATAATTGATGTTATTGGGGTTGTGACATCTGTGAATCCCTCGGTTCCCATCTTGAGGAAGAATGGAATGGAAACACAGAGACGAATTCTGAATGTAAAGGACATGTCTGGCAGGAGTGTTGAGCTAACCCTTTGGGGTGATTTCTGCAATAGGGAAGGTCAAAAGCTGCAAGAGATGGTTGATGGTGGGTTTTTCCCAGTTCTGGCAGTCAAAACTGGGAGGGTTAATGACTTCAGTGGAAAATCTATTGGAACTATTTCTTCCACCCAACTCTTCATCAACCCAGATTTTCCTGAGGCTCATGGATTAAGAGACTGGTTTGATCAAGGAGGAAAAGATTCTGCTTCTTTGTCCATTTCTAAGGACATTACGCCTGGTGGACCTAAGAATGAGATACGTAAAACTGTGTCTCAGATCAAGGATGAAGGCCTGGGGCGAGCAGATAAGCCAGACTGGATAACGATCGACATAAAAGTGACTAGGTCAGGAGGCACTAAATGGCAATGCGATAGATGCAATCAAGAGTTTGAGGAGTGTGATTACCGTTACCTTCTTCAAGCCCAAATTCTGGATCACACCGGAATAACTTGGGTCACTGCATTCCAAGAATCAGGGGGAGGAGATCTTGGGTTGCTCAGCAAAGGAGCTTATGAGGAACAGGATGATGAGAAGTTTGGGGACATAATCCGCAGCAAACTCTTCAACCAGTTTGTGTTTCGGCTGAAGATTAAGGAGGAATTTTATGGTGATGAACAGAGAGTGAAGATTACAGTGGTGAAGGTAGATAAGGTGGATTATTCTTCAGAGAGTAGTAAAGCATCTCCATCTCCTCAGCTTCGCTTGACAGGATCGAAGTTGGCAACACCGATGACGGCACCAACGATGAGCGCAAGCACGATCCCACCGGCGGCGATGCTGAGCAAGAAGTTCTTGAGAGAGGGCGTGACGGCGGCTTCAGCCACATCGGGAACCATCATGGAAGCCGTCAAAGCGGCGGCGGTGAGAGCGGTGACGGCCTTCTCCTTCAAGGAGGCCCTCACTTCAAACCTGGAACTGGGCTTGGATGCAGTGGCCTGGTTTGAAGCCCGAAGAGGCAATGGCTGGAAGAATGCGGCGGAGCTGGGCAGCACCGCCTTCTTGTGGGCGGCGTAA 2091 0.4634 MPVNLTPNAIAAIIAGDVNSKPLVQVLDIKLISNNTQQERYRLLLSDSVSTQHAMLVTQLNDRVRTGRVKKGSVVQLIEYICSHIQNRKIIVVLNMETIIPDCEIIGKPNTYVDSNSTAQKALTNNSMQNLHMINNNRLSAQNSSLDEQNFKPTIQPPFQPPPVYKSHGAIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRATCFNAVVDRFYDAIEVGRVYLISKGSLKPTQKNFNHLKNDWEIFLDWNSTMELCPDEDASIPRQQFSFRPISDIESVDSNCIIDVIGVVTSVNPSVPILRKNGMETQRRILNVKDMSGRSVELTLWGDFCNREGQKLQEMVDGGFFPVLAVKTGRVNDFSGKSIGTISSTQLFINPDFPEAHGLRDWFDQGGKDSASLSISKDITPGGPKNEIRKTVSQIKDEGLGRADKPDWITIDIKVTRSGGTKWQCDRCNQEFEECDYRYLLQAQILDHTGITWVTAFQESGGGDLGLLSKGAYEEQDDEKFGDIIRSKLFNQFVFRLKIKEEFYGDEQRVKITVVKVDKVDYSSESSKASPSPQLRLTGSKLATPMTAPTMSASTIPPAAMLSKKFLREGVTAASATSGTIMEAVKAAAVRAVTAFSFKEALTSNLELGLDAVAWFEARRGNGWKNAAELGSTAFLWAA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1169 696 Pfam OB-fold nucleic acid binding domain 194 266 IPR004365 GO:0003676
Enph12g1169 696 Gene3D - 292 431 IPR012340 -
Enph12g1169 696 SUPERFAMILY Nucleic acid-binding proteins 179 293 IPR012340 -
Enph12g1169 696 SUPERFAMILY Nucleic acid-binding proteins 1 107 IPR012340 -
Enph12g1169 696 Gene3D - 179 289 IPR012340 -
Enph12g1169 696 Pfam Replication factor-A protein 1, N-terminal domain 5 99 IPR007199 GO:0003677|GO:0005634|GO:0006260
Enph12g1169 696 CDD RPA1_DBD_B 314 421 - -
Enph12g1169 696 NCBIfam replication factor-a protein 1 (rpa1) 4 472 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Enph12g1169 696 FunFam Replication protein A subunit 292 431 - -
Enph12g1169 696 SUPERFAMILY Nucleic acid-binding proteins 297 425 IPR012340 -
Enph12g1169 696 CDD RPA1N 9 100 IPR007199 GO:0003677|GO:0005634|GO:0006260
Enph12g1169 696 CDD RPA1_DBD_C 449 579 IPR047192 -
Enph12g1169 696 CDD RPA1_DBD_A 182 285 - -
Enph12g1169 696 Pfam Replication protein A OB domain 303 407 IPR031657 -
Enph12g1169 696 PANTHER REPLICATION FACTOR A 1, RFA1 193 571 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Enph12g1169 696 Gene3D - 3 113 IPR012340 -
Enph12g1169 696 FunFam Replication protein A subunit 4 113 - -
Enph12g1169 696 Gene3D - 433 587 IPR012340 -
Enph12g1169 696 FunFam Replication protein A subunit 179 288 - -
Enph12g1169 696 Pfam Replication factor-A C terminal domain 471 584 IPR013955 -
Enph12g1169 696 SUPERFAMILY Nucleic acid-binding proteins 446 584 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1169 Enph-Chr12 18521851 18525590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1169 26 583 Core DNA Replication Machinery Family AT2G06510 64.026 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1169 K07466 - zju:107409151 902.123