LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph12g1098	ATGGCTCTCGTCCGTCAACGCCGCCATCTCAACCTCCGCCTTCCTCTGCCGGAACCCTCCGAACACCGCCCTCACTTCCCCTTACCCACCACTTCCTCTTCCTCCTTCTCCACCGCCGTAGACATCGTTCCTAACGACATTGAAAAGCTTCAGGTTCTTGGCCACGGCAATGGCGGCACGGTCTACAAGGTCCGCCACAAGCGAACTTCTGCTATCTACGCTCTTAAGGTTGTCCACAGTGGCTCCGATCCGATGATCCGCCGACAAGTCCGGCGAGAGATGGACATCCTCCGACGGACGGACTCACCTTACGTAGTACAGTGCCACGGATTCTTTGAGAAGCCATCCGGAGACGTGACGATTGTGCTGGAGTACATGGACTCGGGCACGCTGGACACTCTGCTGAAGAACAACGGCACTTTCTCTGAACCACAACTCGCGGCGGTGGCGCGTCAGGTTCTTAACGGGCTGAGCTATCTTCACGCGCACAAAATTATCCACCGCGACATCAAGCCGTCCAATCTGCTGGTGAATCAGAATATGGAAGTGAAGATCAGCGATTTCGGAGTTAGCAAGGTCATGAGCCGGACGTTGGACGCGTGTAATTCATACGTCGGTACATGCGCGTACATGAGCCCGGAACGGTTCGACCCGGATAGATATGGCGGGAATTATAACGGGTATGCGGCTGATATATGGAGCTTGGGTCTCACGTTGTTTGAGCTCTATGTGGGTCATTTTCCATTTCTACCGGCGGGTCAGAGACCCGATTGGGCCACCTTGATGTGTGCCATATGTTTTGGCGACCCACCAACCCTGCCGGAAAGTGTGTCCGTCGAGTTTCGGAGTTTCATGGAGTGTTGCTTGAACAAGGAATCAAGTGAGAGGTGGGCGGCGTCTCAGCTTTTATCACATCCGTTTTTGTGCACACAATGA	936	0.5427	MALVRQRRHLNLRLPLPEPSEHRPHFPLPTTSSSSFSTAVDIVPNDIEKLQVLGHGNGGTVYKVRHKRTSAIYALKVVHSGSDPMIRRQVRREMDILRRTDSPYVVQCHGFFEKPSGDVTIVLEYMDSGTLDTLLKNNGTFSEPQLAAVARQVLNGLSYLHAHKIIHRDIKPSNLLVNQNMEVKISDFGVSKVMSRTLDACNSYVGTCAYMSPERFDPDRYGGNYNGYAADIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPTLPESVSVEFRSFMECCLNKESSERWAASQLLSHPFLCTQ	311

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph12g1098	311	FunFam	Mitogen-activated protein kinase kinase 1	29	127	-	-
	Enph12g1098	311	FunFam	Mitogen-activated protein kinase 2	128	311	-	-
	Enph12g1098	311	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	165	177	IPR008271	GO:0004672\|GO:0006468
	Enph12g1098	311	Gene3D	Transferase(Phosphotransferase) domain 1	129	311	-	-
	Enph12g1098	311	Pfam	Protein kinase domain	48	308	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph12g1098	311	ProSiteProfiles	Protein kinase domain profile.	47	308	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph12g1098	311	Gene3D	Phosphorylase Kinase; domain 1	29	127	-	-
	Enph12g1098	311	SMART	serkin_6	47	308	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph12g1098	311	SUPERFAMILY	Protein kinase-like (PK-like)	43	309	IPR011009	-
	Enph12g1098	311	PRINTS	Tyrosine kinase catalytic domain signature	123	136	IPR001245	GO:0004672\|GO:0006468
	Enph12g1098	311	PRINTS	Tyrosine kinase catalytic domain signature	159	177	IPR001245	GO:0004672\|GO:0006468
	Enph12g1098	311	PRINTS	Tyrosine kinase catalytic domain signature	230	252	IPR001245	GO:0004672\|GO:0006468
	Enph12g1098	311	ProSitePatterns	Protein kinases ATP-binding region signature.	53	76	IPR017441	GO:0005524
	Enph12g1098	311	CDD	PKc_MAPKK_plant_like	45	308	-	-
	Enph12g1098	311	PANTHER	MITOGEN-ACTIVATED KINASE KINASE KINASE	41	309	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph12g1098	Enph-Chr12	17862210	17863145	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph12g1098	1	308	MAP Kinase Kinase Gene Family	AT1G73500	63.754	4.72e-141	399

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE7	Enph12g1098		Pkinase	1.6e-66	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph12g1098	K20604		-	qsu:112003150	509.22