Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Enph12g1088 | ATGTTAGCGAATAACCCTCCCTCTTCGGCTCCTTCTTCTGAGCCCTTTCCCTCTGGTGATAATGGTACTATCACGACCAATAAAAGAAAAAGAAGACCTGCTGGAACTCCAGATCCGGATGCGGAGGTGGTGTCGCTCTCGCCGAAGACGTTACTGGAATCGGACCGGTACGTGTGTGAGATCTGTAATCAGGGCTTTCAAAGGGACCAGAATCTGCAGATGCACCGGCGGCGGCACAAGGTGCCGTGGAAGCTGCTGAAGAGGGAGACACCGGCGGCGAGGAAGCGCGTGTTCGTTTGCCCCGAGCCGACGTGCTTGCACCACGACCCGTGCCACGCGCTCGGCGATCTTGTCGGAATAAAGAAGCACTTCAGAAGAAAGCACAGCAACCACAAGCAATGGGTCTGTGAGCGGTGCTCGAAAGGCTACGCAGTGCAGTCTGATTACAAAGCTCATCTAAAAACCTGTGGCACCAGAGGCCACTCTTGCGATTGTGGTCGTGTTTTCTCCAGGGTGGAGAGCTTTATCGAACACCAAGATGCTTGTAACATGGGGCGGCTCCGCACGGAAACACAGCCACCGCAGCAGCAGCCGGTGGCCTGCTTGTCGCGAACCGCTTCGAGCCCAAGTCCGTCCAGCGAAACCAACTTCAGTAATGGTCCTAACTGGCACGGTCTGGTGTTGCCTAAGCCAGCTGAACCCACATTCTTGAACCCTACTATTACTACTGTTGCTCATGAAACCTCATCGAACAATAAGTATAAACTCTGTCCAAACTTGGATCTTCGGCTCTCCACTACCACTTCTGTTATTCCCATTGATACTGAATCGCCTAAGAGAGATGAAACCCGTTCTAACCATTTTCGGATCTCAATTGGGTCATCGGAAATGGGCGAGAAGAATGAATCGAACTGCTTCAATAATCGGAGGAATTCACCGAAGGAGAGCTGTAACAGCAGCGACAAACCTGAAGGTGGAACGATGAGGCTTGTTCAACAAGAGCAAGCACGTGAGCAGTTGAGGTTAGCAATGGCGGAGAAGGCGTACGCAGAGGAGGCAAGGAAGCAAGCGAAGCGGCAGATAGAAGTTGCAGAGAAGGAGTTCGCAAACGCAAAGCGAATCAGACAAGAAGCTCAAGCCGAGCTCGAGAAAGCCTACGCCATCAAAGAACACGCCATCAAACAGATCAACTCCGTCATGCTCCAGATCACTTGCCATGCTTGCAAACGACAGTTCGGAGCCCAGAGGACTCCGACGTCAGCCACTACAGTTCGACCTCCTCCTCCGCCGGACGAGAACTCATTGGTACTGAGCTACATGTCGTCTGCTCTAACAACTGAAGGTGGCGAAGAAGAGAACTATAACAATCATAATAATGAGAAAAATGATGGGAAAAATAGTAACTCTTTCTCGTCAGTACTCTAG | 1425 | 0.5144 | MLANNPPSSAPSSEPFPSGDNGTITTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPAARKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLRTETQPPQQQPVACLSRTASSPSPSSETNFSNGPNWHGLVLPKPAEPTFLNPTITTVAHETSSNNKYKLCPNLDLRLSTTTSVIPIDTESPKRDETRSNHFRISIGSSEMGEKNESNCFNNRRNSPKESCNSSDKPEGGTMRLVQQEQAREQLRLAMAEKAYAEEARKQAKRQIEVAEKEFANAKRIRQEAQAELEKAYAIKEHAIKQINSVMLQITCHACKRQFGAQRTPTSATTVRPPPPPDENSLVLSYMSSALTTEGGEEENYNNHNNEKNDGKNSNSFSSVL | 474 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Enph12g1088 | 474 | SUPERFAMILY | beta-beta-alpha zinc fingers | 54 | 80 | IPR036236 | - | |
Enph12g1088 | 474 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 59 | 79 | IPR013087 | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 189 | 222 | - | - | |
Enph12g1088 | 474 | Coils | Coil | 340 | 395 | - | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 293 | 326 | - | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 415 | 434 | - | - | |
Enph12g1088 | 474 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 17 | 452 | IPR031140 | - | |
Enph12g1088 | 474 | Gene3D | Classic Zinc Finger | 35 | 99 | - | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 460 | 474 | - | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Enph12g1088 | 474 | CDD | ATP-synt_Fo_b | 333 | 396 | - | - | |
Enph12g1088 | 474 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 57 | 79 | IPR013087 | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 293 | 327 | - | - | |
Enph12g1088 | 474 | Pfam | Zinc finger, C2H2 type | 57 | 79 | IPR013087 | - | |
Enph12g1088 | 474 | SMART | c2h2final6 | 134 | 161 | IPR013087 | - | |
Enph12g1088 | 474 | SMART | c2h2final6 | 98 | 128 | IPR013087 | - | |
Enph12g1088 | 474 | SMART | c2h2final6 | 57 | 79 | IPR013087 | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 441 | 474 | - | - | |
Enph12g1088 | 474 | MobiDBLite | consensus disorder prediction | 189 | 226 | - | - | |
Enph12g1088 | 474 | FunFam | protein indeterminate-domain 12-like | 36 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Enph12g1088 | Enph-Chr12 | 17761486 | 17765088 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Enph12g1088 | 5 | 448 | C2H2 Transcription Factor Family | AT1G25250 | 50.112 | 2.88e-124 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Enph12g1088 | zf-C2H2 | 0.0045 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Enph12g1088 | K25871 | - | gmx:100800187 | 623.239 |