LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph12g1080	GTCCCAGTGCGTTCTCAGCCACAAGCCTCGCTCGTCTTCTCGAACCATCCATTGAGATTTTTATTTCACCTCAAAAATATTTTGCCCTGTCTCACGTGGCACCCTCTCCCTTTTTTCCACAGGTTTTTTTTATTATTTTTTCTCACTTTATTTTACTGCTCCCCCATAAACTCTTTCTCCTCCTTCTCTACTCTATTTCTCACCTTCCTTTTATTTCCTCCCTCAGACCACTTCGCTGCTCTCGGAATATACAACATTCTCGAGGCAGTGTGTATTTTCCCGTGCATCATAATCGCAGAAAATTTTGTTTCTCCGGCAAAATTCGAGGCTTCTGGCTTTTTTGCTCACTATAAAGGTGAGAGAGTTTTCTCCGGCGGGACTTACTCTGATTTTGCTCCAATGGAAATGCAGGACCAAAGAGAAGGAACGAAGTCAAATAACCCTAGCAATGCTAGTAACAACCATTATGATAGTGGTATAAAATCTGAAAATGTTGCCCTATTGAAGAATCAAACTCCTAATGGAAACAACCATACTCTTAAGGTGAGGAAACCATATACCATTTCCAAGCAAAGAGAAAAGTGGACTGAGGAAGAGCATCAGAAGTTCCTAGAAGCTTTGAAATTGTATGGCCGGGGTTGGCGTCAAATTGAAGAGCACATAGGTACAAAAACTGCAGTTCAGATTCGAAGCCATGCTCAGAAGTTCTTCTCTAAGGTTGCCCAGGAATGCGATGGAACTGCTGAAAGTGCTATGAAACCAAGTGATATACCTCCTCCTCGACCAAAGAGGAAACCCCTGCATCCATATCCCCGTAAATCAGTTGATTCTTTCAAAAGACTATCCATAGGAAATGAGGAAGAAAGATCTCCATCCCCAAACCTGTCGGTTGCTGAGAAAGACACCCAATCTCCGACTTCTAAGCACGAGTTGAGTTCCAAGGATATTGAATTTTCTTTGGAAGATGCTACCAACATGACCCAGGTTGCAAGTTTTAAGCTGTTTGGAAGAACTGTCTGGTTGGTAGATAATCAGAAGTCGCATGATGTAGATGTAGGGAATATCAAGTCAATTGCATGCAAGTCTGATCCAGTGGATGATGTTGAGAACGAAGAGCTTGGTCAAGCATGTCCATCTAGCTCACTAGATTCACAATTATCAGTGGGCATTTGTAATAGTACTAACTGGAATACAGCCCTTGAAGGAGCTAAAGCAAAATTCTCAGAACAACGTATGGAGAACCCTTGCTTTGTTGAACCAGCTCCTGACGAAACTGTGTCATGGTGGAATACGCACCGAGGTCTTCCATTTTTCTACATTCTCCCATGTAACCAAATTCTAAATCCTAAATCTGCTCGGCCCTCTTTGAAAGACAGACTGACAGATAAGGGAACTTCATGTACTGGTTCAAATGTTGAAGCTGTTTGGGAAATGGAAACTGGAGACAGGTACTCAGAATCTGATGATTCTCAAAGCCAATTGTCTCGTCACGAGGGAGAAAATGTACTACACGGAGAGCTTTCAGGAGGCTCTGTTCCATATAAAAGATGTTTAGTTGAGAGAGATGCAAACTCAGCTTTTGTTGCATTGGAAGAGAGGAAGGGACAACGGGCTAGGGTATGCTTATAG	1629	0.4254	VPVRSQPQASLVFSNHPLRFLFHLKNILPCLTWHPLPFFHRFFLLFFLTLFYCSPINSFSSFSTLFLTFLLFPPSDHFAALGIYNILEAVCIFPCIIIAENFVSPAKFEASGFFAHYKGERVFSGGTYSDFAPMEMQDQREGTKSNNPSNASNNHYDSGIKSENVALLKNQTPNGNNHTLKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVAQECDGTAESAMKPSDIPPPRPKRKPLHPYPRKSVDSFKRLSIGNEEERSPSPNLSVAEKDTQSPTSKHELSSKDIEFSLEDATNMTQVASFKLFGRTVWLVDNQKSHDVDVGNIKSIACKSDPVDDVENEELGQACPSSSLDSQLSVGICNSTNWNTALEGAKAKFSEQRMENPCFVEPAPDETVSWWNTHRGLPFFYILPCNQILNPKSARPSLKDRLTDKGTSCTGSNVEAVWEMETGDRYSESDDSQSQLSRHEGENVLHGELSGGSVPYKRCLVERDANSAFVALEERKGQRARVCL	542

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph12g1080	542	MobiDBLite	consensus disorder prediction	247	313	-	-
	Enph12g1080	542	CDD	SANT	194	237	IPR001005	-
	Enph12g1080	542	MobiDBLite	consensus disorder prediction	481	503	-	-
	Enph12g1080	542	MobiDBLite	consensus disorder prediction	136	156	-	-
	Enph12g1080	542	MobiDBLite	consensus disorder prediction	139	156	-	-
	Enph12g1080	542	PANTHER	SWI/SNF COMPLEX-RELATED	154	347	-	-
	Enph12g1080	542	SUPERFAMILY	Homeodomain-like	186	240	IPR009057	-
	Enph12g1080	542	Gene3D	-	194	241	-	-
	Enph12g1080	542	MobiDBLite	consensus disorder prediction	287	302	-	-
	Enph12g1080	542	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	190	239	IPR006447	GO:0003677
	Enph12g1080	542	Pfam	Myb-like DNA-binding domain	192	235	IPR001005	-
	Enph12g1080	542	ProSiteProfiles	Myb-like domain profile.	187	237	IPR001005	-
	Enph12g1080	542	FunFam	protein REVEILLE 6 isoform X1	194	242	-	-
	Enph12g1080	542	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	187	241	IPR017930	-
	Enph12g1080	542	MobiDBLite	consensus disorder prediction	481	507	-	-
	Enph12g1080	542	MobiDBLite	consensus disorder prediction	258	286	-	-
	Enph12g1080	542	SMART	sant	191	239	IPR001005	-
	Enph12g1080	542	ProSiteProfiles	SANT domain profile.	190	241	IPR017884	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph12g1080	Enph-Chr12	17704144	17707882	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Enph12g1080		Myb_DNA-binding	1.9e-13	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph12g1080	-		-	pcin:129319842	303.138