Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1061 ATGTCTTCTGCCGGCGGCGACGGCGGAGGGAGCGGAGGCGTCGGCGGCGTTACCTCCAGCGGTTCTCCACAATTCTATTTCTGCCATCAGTGTAACTCCACCGTATCCATTTCGACTTCATCTTCCGGTGATCTCGCCTGTCCCCATTGCAACGGCGGCTTCATCGAGGAAGTTGATAATCCGAGCCCTAATCTTAGCAATCCCTTCTTTTCGTTTACCTCTGAGTTTGACGGCGGCGGCGGAAGTTCTGGCTTTCCTTTAGTGTTCTCTACCACTTCCACCGGCGGTGGTAGTGGTGCTGGTGGACCGATATTTGACGATCTCTCTGCTCTTTTTGGTGGTGGAGTTCATCGATCGTCTCCATTCGGAGAAGCTGATGCGTTCAACCCTTTTGTGTTTCTCCAGAACTATCTTCAAACCCTGAGAGCCGGCGGTGCTAATGTTCAATTTGTGATAGAGAACTCTGGAGACCCGAGTGGAACCTTCCGTCTCCCCGCGAATCTCAATTTTGGTGATTACTTTTTCGGACCTGGTCTCGAGCAATTGATTCAACAGCTCGCGGAGAACGATCCGAACCGACATGGGACGCCCCCAGCTTCGAAATCTGCCGTAGGTGGGCTCCCTAATATTAAGATATCGGAAGAGTTGTTGGCTTCGGATTCATCGCAGTGTGCGGTTTGTAAAGATATATTTGATCTTGGGGAAGAGGTGAAGCAGATGCCATGTAAACACATCTATCATTCAGATTGCATTCTGCCTTGGTTGGAATTACACAATTCTTGTCCCGTTTGCCGGTACGAGTTACCAACCGACGATCCTGACTACGAGCAACGAACTCGTGGGACTTCTACCCAGGTGAATCGAAACCAAACTGCAGAGGAAGGTGGGCACACCGGTTCTTCTGAAGCAGGTAATGGTGGCAATGAAGGTAATGGTGGTAGCGGCGGTGTTGGTGGTAGTGCAGCATCAGGAGATGAAACACCGAGAGAGCGCAGGTTTAGGGTTTCTTTGCCTTGGCCTTTTAGGCAACTGGCTTCCATTGCGGAGACTAGCAATACTGGGAATACCAACGTCAGCGGAAACAATAGCGAGGAATCATATCCTGGAAGAAGTGGAAACCAGAATTTTGAGTCGGAGACCAGACAAGAAGATCTCGATTAA 1161 0.5039 MSSAGGDGGGSGGVGGVTSSGSPQFYFCHQCNSTVSISTSSSGDLACPHCNGGFIEEVDNPSPNLSNPFFSFTSEFDGGGGSSGFPLVFSTTSTGGGSGAGGPIFDDLSALFGGGVHRSSPFGEADAFNPFVFLQNYLQTLRAGGANVQFVIENSGDPSGTFRLPANLNFGDYFFGPGLEQLIQQLAENDPNRHGTPPASKSAVGGLPNIKISEELLASDSSQCAVCKDIFDLGEEVKQMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDPDYEQRTRGTSTQVNRNQTAEEGGHTGSSEAGNGGNEGNGGSGGVGGSAASGDETPRERRFRVSLPWPFRQLASIAETSNTGNTNVSGNNSEESYPGRSGNQNFESETRQEDLD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1061 386 MobiDBLite consensus disorder prediction 279 308 - -
Enph12g1061 386 ProSiteProfiles Zinc finger RING-type profile. 224 265 IPR001841 -
Enph12g1061 386 Pfam Ring finger domain 223 265 IPR001841 -
Enph12g1061 386 MobiDBLite consensus disorder prediction 346 386 - -
Enph12g1061 386 FunFam E3 ubiquitin-protein ligase RING1-like 185 271 - -
Enph12g1061 386 Pfam zinc-ribbon 24 57 IPR039525 GO:0061630
Enph12g1061 386 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 120 269 - -
Enph12g1061 386 MobiDBLite consensus disorder prediction 346 376 - -
Enph12g1061 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 185 271 IPR013083 -
Enph12g1061 386 MobiDBLite consensus disorder prediction 269 330 - -
Enph12g1061 386 SUPERFAMILY RING/U-box 208 272 - -
Enph12g1061 386 CDD RING-H2_RNF126-like 223 265 - -
Enph12g1061 386 SMART ring_2 224 264 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1061 Enph-Chr12 17573368 17574528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1061 165 314 C3H Transcription Factor Family AT5G01980 44.000 1.72e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1061 K11982 - qsa:O6P43_005293 452.21