Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0943 ATGTTACTTACGCACAGGCTCACTTTTGTTTGTGCTTGGGCGTGCCGTGGAGAGATAGAGGTGGGAGGACTTCGTAAAATTGAAGGAGTATGGGGGTATTTCATCAATCATCTGCAGTTACCTTACCTTATACCAAATAACAGAGAGTACGGAGTAAAGACTTCTCCAGATCCAACACCTGTGTCCTTCGGAAGGGAAGATAGCGAACCAGTGACCGCAAGGTCTCCGCTTGCCAAGGTTTCTAAAAACTTGTGGTCAGGGGAAATGAGGTCTATCTTTTGTGGAAACTTTGAATATGATGCTCGGCAGTCTGATCTAGAGCGGCTTTTTAGAAGATATGGGAAGGTTGATAGGGTCGATATGAAGTCTGGGTTTGCCTTTGTCTATATGGAAGATGAGAGAGATGCTGAAGATGCAATTCGTGCGCTTGATCGGGTAGAATTTGGTCGAAAGGGACGAAGACTTCGTGTGGAATGGACAAAACATGAACGTGGCATTAGAAGGCCCAGCAGTTCAAGGAGATCTTCATCCAATTCAAAGCCATCAAAGACTTTGTTTGTTATTAATTTTGATACATATCATACCAGGACTAGGGATTTGGAGAGGCACTTTGAGCCATATGGCAAGATAGTCAGTGTGAGGATTAGAAGGAATTTTGCATTTGTCCAGTATGACTCATATGATGATGCCATCAGAGCATTGGAAGCTACAAATATGAGCAAGTTACTGGATCGAGTTATTTCAGTTGAATTTGCTGTGGAGAATGATGATGACAAGAGAAATACATTTAGCCCTGATAGAAGATATGATCGTCCACATGATATAAGCAATGATAGAAAGCGATCACCAAGTCCTTATCGCCGAGAAAGAGGCAGCCCTGATTATGGCCGTGTCTCCAGCCCATATGGGAGAGTGAAGAGCAGCCCTGACTATGGTCGTAGCCGCAGTAGAAGTCCACAACAGATTGGGAGAGGTAGCCCTGACATTAATCAGAGGAGCCGTAGTCCATATAGAAGAGAGAGAGGTGATTCACCTGTTCGTGGCTCTAGCCCGTATGGGAGAGTAAAGAGGAGCCCTGACTATGGTCTTAGTCAAAGTCCACAAAAGACTGATAGAGGTAGCTCTGATTTTAATCAGAGGAGCCATAGTCCATATAGAAGAGAGAGGGGTGATTCGGACCCTATTCATGGCTCTAGCCCTAGTCCTTATCACAAAGATCAAGCAAGAACTGACCGTAGTAACTCTCACTCCCATAATCCTGATGGAAGAGAGAGGGTGAGCCCTCAAAACGGTAATGGTTCCAACAGTAGTCCTTATTACGGGAAGAGGTCAAGCCCTGAAAATGGTCGTGACACTATAAGCAGTCCCGATGCAAGAGGTGGTCGTAGTCCTTATGATGGTGATGCAGGTCACCTAAATTCTATGGCGGAGCCAAAGGACAGCCCCAACTTTAGTGCTCCTGAAAGTCCCTTGAATGAAAGATACCGCAGCCACTCTCCTGCAGGTGAAGAATGA 1515 0.4541 MLLTHRLTFVCAWACRGEIEVGGLRKIEGVWGYFINHLQLPYLIPNNREYGVKTSPDPTPVSFGREDSEPVTARSPLAKVSKNLWSGEMRSIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFVYMEDERDAEDAIRALDRVEFGRKGRRLRVEWTKHERGIRRPSSSRRSSSNSKPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYDSYDDAIRALEATNMSKLLDRVISVEFAVENDDDKRNTFSPDRRYDRPHDISNDRKRSPSPYRRERGSPDYGRVSSPYGRVKSSPDYGRSRSRSPQQIGRGSPDINQRSRSPYRRERGDSPVRGSSPYGRVKRSPDYGLSQSPQKTDRGSSDFNQRSHSPYRRERGDSDPIHGSSPSPYHKDQARTDRSNSHSHNPDGRERVSPQNGNGSNSSPYYGKRSSPENGRDTISSPDARGGRSPYDGDAGHLNSMAEPKDSPNFSAPESPLNERYRSHSPAGEE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0943 504 MobiDBLite consensus disorder prediction 257 504 - -
Enph12g0943 504 SUPERFAMILY RNA-binding domain, RBD 89 257 IPR035979 GO:0003676
Enph12g0943 504 FunFam Serine/arginine-rich splicing factor RS31 89 173 - -
Enph12g0943 504 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 183 254 IPR000504 GO:0003723
Enph12g0943 504 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 90 162 IPR000504 GO:0003723
Enph12g0943 504 MobiDBLite consensus disorder prediction 361 380 - -
Enph12g0943 504 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 184 436 - -
Enph12g0943 504 MobiDBLite consensus disorder prediction 424 452 - -
Enph12g0943 504 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 92 150 IPR000504 GO:0003723
Enph12g0943 504 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 185 247 IPR000504 GO:0003723
Enph12g0943 504 SMART rrm1_1 184 250 IPR000504 GO:0003723
Enph12g0943 504 SMART rrm1_1 91 158 IPR000504 GO:0003723
Enph12g0943 504 MobiDBLite consensus disorder prediction 257 294 - -
Enph12g0943 504 MobiDBLite consensus disorder prediction 405 423 - -
Enph12g0943 504 MobiDBLite consensus disorder prediction 312 332 - -
Enph12g0943 504 Gene3D - 174 264 IPR012677 -
Enph12g0943 504 Gene3D - 85 173 IPR012677 -
Enph12g0943 504 CDD RRM1_AtRSp31_like 90 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0943 Enph-Chr12 16048370 16053011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0943 91 272 Eukaryotic Initiation Factors Gene Family AT1G49760 23.267 1.47e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0943 K12893 - gmx:100781534 506.138