Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0933 ATGAGAATGAGTGGAAAGGGGGCAGGGAAGTTAAGTTACAGAAATGGTAGTCGTGGACTGGTACCGCAGTACTGCCTACTTTTGGTAATCCTTATTGTGATCTCTCAGTCAGCATATCAATTTGATAAAGGGCGTGAGCACTCCACTCAAGTATGTGGAGGTGCTTTTCGGCTCATTGTGCTTGCGAGACGATCCTCGGATCGAGAGAGCTATCGGTATCGTTGTTCTATGGATGTGGATGAAGGGAATGCGCTCGCATTCCAGGGTATAGGCGGGTTACCTGCGGATACCAGGAGCCAGAAAGCATCCCTTCCATTTTTGCACTGTGAATCTCCGAAAGCCAACGGAATGCCTGCGAAGCGGTCCCATGGGTTTTCTGACGCATCAGGTTTCTCTGGACCACGGAGGATCCCGAAATTTTTTACCGGCGCTTCAACGTGGGGGCGGGTTCATGGTGGGAATTATCAAATGGTTATGAGGAATGAAAAAGGGCGTTGTCATTATGGAGATAGGTGTAGGTTTCTTCACTCTTGGAGTTCAGGTGATGGTTTTTCGTTACTGACTCGGCTTAAAGGGCATCAGAAGGTAGAGAATTCCGGTGTTAATAAGTCATTTGTGGTTATTAGTGGAATCGCCATGTCGTCTGATTCTGATAAACTATATACTGTAAGCAAGGATGAAACCTTGCGGGTTTGGGACTGCCAGTCTGGAAAGGTGCTTGATTTTTGTCAAACTACAATTTTGTCTTGGTTCTTGGAAAACTTAGTCTTCTTCAGTGCTGTTCACTCTCCAGTACTTGTCATACTGGTTGCTGATGATCTTCTCAGCATCTGTATGGCTGTGGTCAAACTTGGCAGTGAAGTAGGTTGCATGATCAGTGAAGGTCCTTGGATTTTTGCTGGCACTATTAATTTTGTTAAGGCAAGAAATTGTCCTTTGCTTTTATATGTTTCTTCCTCCTGTTTTACCAATGGAAATTTGAAGTCTAATACACTCATTGATTTTGTGAAATTTCATTGTGTCACTCATAGCAGCATGGCTAATATCCTGTTTTGTTGGTGGCATGAATTGCAGCCCTGGAACACTCAAAACTCAACGGAGCTAAGTCTGAGTGGCCCAGTTGGACAAGTTTATGCGCTGGTTGTGGGCAATGATTTGCTTTTAGCTGGTGCCCAGATAGATTTGCTAGAGAGAATTCAACTAGGAGAGTTTAAGGAGACGAGCAGGAGGCTAAGTAGGATAATATTAGTCTTTGTCATGAGTGGAGGTCTTACTTTAGATGATATAGGATTGTTGAAAGATGAATACACTTACAGTATAACATTATTTGATTATGATGGATCTATTTTGGCATGGAAGTTTAATGTAATCGCCCACTGTTTTGAGCCTGCCGTATCTCTTAAAGGACATTCCCTTGCAGTTGTTTCGTTAGTTGTTGGAGCTAACAGGCTTTACTCTGGCTCCATGGACAATACAGTGAGATTTTGGCTCTTCCAACTGATTGCTGTCTTTCAGGTCTGGAATCTTGAAACTTTGCAGTGTTTACAGACACTAACAGACCACACATCTGCAGTGGTGTCTGTTCTTTGTTGGGACCAGTTTCTCTTGTCTTGTTCATTGGACAAAACACTAAAGGTTTGTGTCGCTAAAACTCGGAAGTGGCATATACACACAATGAAGAACATGTATGCTAAATTTATTTGCCTTCTGGATGCTTGGAACTCGTCAAAATATATAAAAAAAACTTCTCAAGTTTCTGATATTGAAAGATTTTTTCAACCTGCAATCCTTGACGGACTAGACCAAGATGGCTACTATACATTTGCAGAGAGAGGCAAGATTTTCAGTAAACAAGAGGTTCGAGCAATGCAAGTGGGTCCTGGTCGCTTATTTTTCACTGGTGATGGGACAGAAAAGTCAAAAGTGATGCATAGTCCAAAAGGGCGATGGATGAAGGTGAAGATTATCAACTGGATTGAACCAGATGATGACACCTTACATAGGTATGATGAAATACTCAGAAAAAAAAAAGAAAAACATATCCTCAGAAAGATGACACAAAGTGGAGGAGCTGATGAGACCAACAAGGTTGCTTGGCTTGTAGGTGTAAAACATCTAAACAAAGTGGAGGAGCTGATGAGAACGTATGCACTTGATATTTAA 2163 0.4216 MRMSGKGAGKLSYRNGSRGLVPQYCLLLVILIVISQSAYQFDKGREHSTQVCGGAFRLIVLARRSSDRESYRYRCSMDVDEGNALAFQGIGGLPADTRSQKASLPFLHCESPKANGMPAKRSHGFSDASGFSGPRRIPKFFTGASTWGRVHGGNYQMVMRNEKGRCHYGDRCRFLHSWSSGDGFSLLTRLKGHQKVENSGVNKSFVVISGIAMSSDSDKLYTVSKDETLRVWDCQSGKVLDFCQTTILSWFLENLVFFSAVHSPVLVILVADDLLSICMAVVKLGSEVGCMISEGPWIFAGTINFVKARNCPLLLYVSSSCFTNGNLKSNTLIDFVKFHCVTHSSMANILFCWWHELQPWNTQNSTELSLSGPVGQVYALVVGNDLLLAGAQIDLLERIQLGEFKETSRRLSRIILVFVMSGGLTLDDIGLLKDEYTYSITLFDYDGSILAWKFNVIAHCFEPAVSLKGHSLAVVSLVVGANRLYSGSMDNTVRFWLFQLIAVFQVWNLETLQCLQTLTDHTSAVVSVLCWDQFLLSCSLDKTLKVCVAKTRKWHIHTMKNMYAKFICLLDAWNSSKYIKKTSQVSDIERFFQPAILDGLDQDGYYTFAERGKIFSKQEVRAMQVGPGRLFFTGDGTEKSKVMHSPKGRWMKVKIINWIEPDDDTLHRYDEILRKKKEKHILRKMTQSGGADETNKVAWLVGVKHLNKVEELMRTYALDI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0933 720 Gene3D - 168 327 IPR015943 GO:0005515
Enph12g0933 720 Gene3D - 339 553 IPR015943 GO:0005515
Enph12g0933 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 208 242 IPR001680 GO:0005515
Enph12g0933 720 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 467 496 - -
Enph12g0933 720 ProSiteProfiles Zinc finger C3H1-type profile. 162 179 IPR000571 GO:0046872
Enph12g0933 720 ProSiteProfiles Trp-Asp (WD) repeats profile. 467 496 IPR001680 GO:0005515
Enph12g0933 720 Pfam Nucleoporin Nup120/160 179 240 - -
Enph12g0933 720 SMART WD40_4 511 548 IPR001680 GO:0005515
Enph12g0933 720 SMART WD40_4 460 497 IPR001680 GO:0005515
Enph12g0933 720 SMART WD40_4 183 233 IPR001680 GO:0005515
Enph12g0933 720 SUPERFAMILY WD40 repeat-like 185 554 IPR036322 GO:0005515
Enph12g0933 720 Pfam WD domain, G-beta repeat 466 496 IPR001680 GO:0005515
Enph12g0933 720 Pfam WD domain, G-beta repeat 513 546 IPR001680 GO:0005515
Enph12g0933 720 PANTHER - 152 644 IPR044715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0933 Enph-Chr12 15966180 15972204 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Enph12g0933 Nup160 6.9e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0933 - - cave:132182497 385.571