Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0929 ATGGTGAGAGGGAAGGTTCAAATGAAAAGGATTGAGAACGCAACCAGTCGTCAAGTGACGTTTTCAAAGCGTAGGAATGGACTTCTGAAGAAAGCCTATGAGCTATCTGTTCTTTGTGACGCCCAAGTAGCTATCATTATCTTTTCACAGCGAGGCAGACTGTATGAGTTCTCAAGTTCTGATATCAGAGAGATTTTGGAGCGATACTGGAAATGCACCAAAGGTGATGTGGCCACCAACTTTGAAGAACAACACAGAGAGGAACTGAAGCTTGAATCTGCGATCATGGCCAAAAAGATTGAGCTTCTTCAACATTCTCAAAGGAAACTGATGGGAGAAGGGTTGAGTTCATGTTCAATTGAAGAACTTGAAGAGACGGAGAATCAGCTGGTCACAAGTTTGCAGAACGTCAAACTTAGAAAGAGTCAGCTATATCAAGAGCAAATACAAAAACTCCAAGACAAGGAAAGAAATTTGCTCCAAGCGAATGCCAGCTTAAGTAAAATGTGTTTATCGCAGCAGCAATCTGCTCAGCACAAAGAAGCATTGGTAGAAACTGAATTATGTATTGGACTCCCTCAAAACCCATGTTCATAA 597 0.4154 MVRGKVQMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVAIIIFSQRGRLYEFSSSDIREILERYWKCTKGDVATNFEEQHREELKLESAIMAKKIELLQHSQRKLMGEGLSSCSIEELEETENQLVTSLQNVKLRKSQLYQEQIQKLQDKERNLLQANASLSKMCLSQQQSAQHKEALVETELCIGLPQNPCS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0929 198 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Enph12g0929 198 Gene3D - 14 92 IPR036879 GO:0003677|GO:0046983
Enph12g0929 198 Pfam K-box region 82 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Enph12g0929 198 Coils Coil 120 140 - -
Enph12g0929 198 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Enph12g0929 198 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Enph12g0929 198 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Enph12g0929 198 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Enph12g0929 198 FunFam MADS-box transcription factor 1 13 84 - -
Enph12g0929 198 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Enph12g0929 198 SUPERFAMILY SRF-like 3 89 IPR036879 GO:0003677|GO:0046983
Enph12g0929 198 Coils Coil 142 169 - -
Enph12g0929 198 CDD MADS_MEF2_like 3 76 IPR033896 GO:0000977|GO:0045944
Enph12g0929 198 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 164 - -
Enph12g0929 198 ProSiteProfiles K-box domain profile. 86 181 IPR002487 GO:0003700|GO:0005634|GO:0006355
Enph12g0929 198 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0929 Enph-Chr12 15905674 15911045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0929 1 155 MADS-box Gene Family AT2G45660 59.615 3.90e-62 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Enph12g0929 K-box 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0929 - - zju:125421449 233.032