Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0846 ATGGCGGATCTTGCTAGCTACAGGAATGCCGATCATGACTTCGAGCAGGATGAATCATCTTTGATCTGGATTTCAAGCAGTGGAGAAAGAAGATTGAAGCTTTCTTCTGTCTTAAGAATTATCCCCGGACAAAGAACAGCTGTTTTTCAACGGTATCTGAGTCTTGAGAAGGACTATTTGTCTTTTTCCCTTATTTATAACAACGGAAAGCGGTCCCTTGATTTGATTTGCAAGGATAAAGTTGAGGCAGAAGTGTGGATTGCTGGCCTTAGAGCTCTGATATCTTCTGGCCAAGTTGGGCGATCCAAAATTGATGGATGGAGTAATTGGGGTCTCTATCTTGATGATAACAGAGACTTGACATCAAGTAGTCCAAGTGAAAGTTCAGTTAGTACTTCACGAGATGTTAAATCTCCTGAAACGTCTGTAAATTTTAATCCTAATACTTCTCCAAAGTCCTTTCAACCAGTTAATTCTGTGAATTCTGAGAGATTGCATTCGCCATCAGACCCTACAAATATGCAAGTAAAAGGATCTGGTTCAGATGCTTTTCGAGTTAGTGTTTCAAGTGCCCCCAGCACATCAAGTCACGGGTCTGCCCCAGATGACTGTGATGCTCTGGGTGATGTATACATATGGGGGGAGGTTATCTCTGAGAATGTCATGAGAGTTGGCGCAGATAAAAGTTTCAATCATTTCAGTCCAAGGGTAGATGTGCTTTTGCCCAGGCCACTAGAGTCCAATGTAGTTTTAGATGTACATCATATAGCATGTGGTGTGAAACATGCTGCTCTAGTCACAAGGCAAGGTGAAGTATTTACATGGGGTGAAGAATCTGGAGGACGTCTAGGCCATGGTGTTGAGAAGAATGTGGTTCAACCTCGTTTAGTTGAAGCGCTGGCTTCTACAACTATTGATTTCGTTGCCTGTGGGGAGTTTCATACCTGTGCTGTTACAATGGCTGGAGAACTATATACATGGGGTGATGGAACTCATTATGCTGGACTTCTTGGTCTTGGCACTGATGTAAGTCATTGGATACCAAAAAGAATTTCAGGTCTACTGGAGGGACTTCAAGTTGGTTTCGTCACTTGTGGTCCATGGCACACAGCCTTGATAACTTCAACTGGGCAACTCTTTACATTTGGTGATGGAACATTTGGTGTTCTGGGTCATGGAGATAGGGAGAATGTTTCATATCCTAGAGAAGTAGAATCATTGTCAGGTTTAAGAACTATAGCAGTTGCATGTGGAGTGTGGCATACTGCAGCTGTTGTTGAGGTTATTGTGACACAATCTAGTTCAAGTGTATCATCAGGTAAATTGTTTACTTGGGGTGATGGAGATAAAAATCGCCTTGGACATGGAGACAAGGAGGCCCGGCTTGAACCAACTTGTGTGCCTTTACTTATTGATTACAATTTTTACAAAATTGCTTGTGGTCACAGCTTGACAGTTGGCCTCACAACATCAGGCCGTGTTTTTACAATGGGAAGCACTGTTTATGGTCAGCTTGGCAATCCACAGTCAGATGGAAAGCTGCCATGCTTGGTTGAAGACAAGCTTTCTGAAGAACATGTGGAAGAAATTGCATGCGGTGCCTATCATGTTGCAGTTTTGACATCGAAAAATGAAGTTTATACATGGGGGAAGGGTGCTAATGGGAGGTTGGGTCATGGAGATATTGAAGATCGAAAATCCCCAACTTTGGTTGAAGCTTTGAAAGATAGACATGTTAAAAATATTGCATGTGGTTCAAACTACTCTGCTGCCGTATGCCTTCACAAATGGGTATCAGGTTCTGAGCAGTCTCAGTGCTCTGCTTGTAGGCAGCCATTTGGTTTCACTAGAAAGAGGCACAATTGTTATAATTGTGGGCTTGTGCATTGTCACTCATGCAGTTCAAGGAAAGCATTAAGAGCAGCATTAGCTCCTAATCCTGGCAAGCCATCTCGTGTTTGTGATTCTTGTTTTGTAAAATTGAACAAGATGGCAGAAGCTGGCATTAATAATAGAAGGAATGCTATGCCACGTTTATCTGGTGAAAACAAGGACAGGCTTGACAAATCTGATATAAGGTTGGCCAAGTCACCAGTTCCTTCTAATATGGATTTGATAAAACAGCTAGATAGCAAGGCAGCCAGACAAGGTAAAAAGACTGATACATTCTCTCTGGTTCGCATCTCACAAGCCCCTTCTTTGCTGCAGTTGAAAGATGTCGCGTTGTCTACTGCTGTTGATCTGAGACGTACAGTTCCAAAGCCAGTTCTTACATCATCTGGAGTAAGCTCTAGGTCTGTGTCCCCTTTTACTAGAAGACCAAGTCCACCTCGTTCAGCTACGCCCATTCCAACAACATCAGGACTTTCTTTCTCAAAAAGTATAACTGATAGTTTGAAGAAAACAAATGAACTTTTAAATCATGAAGTGTTGAAGCTACAAACTCAGGTTGAGAATCTGAGAAAAAGATGTGATTTACAAGACTTAGAGATTCAAAGGGCTGAGAAGAGAACTCAGGAAGCTATGACACTGGCGGCTGAGGAATCTGCTAAATCTAAAGCTGCAAAAGAAGTTATAAAGTCACTTACAGCTCAGCTCAAAGATCTCGCTGAGAGGCTTCCTCCAGGAGCTTATGATGCTGACAACATCCGGCCAGCTTCCTTGCCAAATGGTTTTGAACCAAATGGCATCCACTATCCTGACTCAAATGGGGAGGCATATACCAGAGCAGAGTCAATCAGTGGCTCTAGCTTGGCCTCCATTCCTCTTGAATCTTCTCTGTTCAACAAAACTGAGGTCATAGGAACTCATGCAACCAATCCTTACCAGCAAAGTCGAGGGCTTATGCCTTCCAATGGGACAAATGAATACCCAAATGTTAGACTTCTTGCCAATGGTGGTATGATTCAGGCAACCAGCAGCAGCATGTTAGATACTGCTGATGGCAGGAATTCTGGACCTCTCCAAGATGGTGAGTGTGGTTTGAGATCAAGGAGTGCTGTAGTGGCTACTAATAGTCATCAAATTGAGGCAGAATGGATTGAAGCATATGAACCTGGGGTGTATATAACACTCATGGCTTTGCGTGATGGAACAAGAGATCTAAAACGAGTGCGCTTCAGCCGACGAAGATTTGGAGAGCACCAAGCAGAGACTTGGTGGTCCGAGAATCGTGAGAAGGTATATGAAAGGTACAATGTTCGTGGTAGTACTGAGAAGTCTTCGAGCCAAACAGCTTGTGGGTCTGAGGGTGCAGTTTCACCTGTTTCGAAATCCTAG 3279 0.4318 MADLASYRNADHDFEQDESSLIWISSSGERRLKLSSVLRIIPGQRTAVFQRYLSLEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLRALISSGQVGRSKIDGWSNWGLYLDDNRDLTSSSPSESSVSTSRDVKSPETSVNFNPNTSPKSFQPVNSVNSERLHSPSDPTNMQVKGSGSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVISENVMRVGADKSFNHFSPRVDVLLPRPLESNVVLDVHHIACGVKHAALVTRQGEVFTWGEESGGRLGHGVEKNVVQPRLVEALASTTIDFVACGEFHTCAVTMAGELYTWGDGTHYAGLLGLGTDVSHWIPKRISGLLEGLQVGFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEARLEPTCVPLLIDYNFYKIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKLSEEHVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKSPTLVEALKDRHVKNIACGSNYSAAVCLHKWVSGSEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPSRVCDSCFVKLNKMAEAGINNRRNAMPRLSGENKDRLDKSDIRLAKSPVPSNMDLIKQLDSKAARQGKKTDTFSLVRISQAPSLLQLKDVALSTAVDLRRTVPKPVLTSSGVSSRSVSPFTRRPSPPRSATPIPTTSGLSFSKSITDSLKKTNELLNHEVLKLQTQVENLRKRCDLQDLEIQRAEKRTQEAMTLAAEESAKSKAAKEVIKSLTAQLKDLAERLPPGAYDADNIRPASLPNGFEPNGIHYPDSNGEAYTRAESISGSSLASIPLESSLFNKTEVIGTHATNPYQQSRGLMPSNGTNEYPNVRLLANGGMIQATSSSMLDTADGRNSGPLQDGECGLRSRSAVVATNSHQIEAEWIEAYEPGVYITLMALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRGSTEKSSSQTACGSEGAVSPVSKS 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0846 1092 FunFam Putative E3 ubiquitin-protein ligase HERC1 602 670 - -
Enph12g0846 1092 SUPERFAMILY FYVE/PHD zinc finger 596 666 IPR011011 -
Enph12g0846 1092 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 600 662 IPR017455 -
Enph12g0846 1092 MobiDBLite consensus disorder prediction 1068 1092 - -
Enph12g0846 1092 Coils Coil 852 872 - -
Enph12g0846 1092 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 322 376 IPR000408 -
Enph12g0846 1092 ProSiteProfiles BRX domain profile. 1011 1066 IPR013591 -
Enph12g0846 1092 Pfam Transcription factor BRX N-terminal domain 847 881 IPR027988 -
Enph12g0846 1092 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 208 269 IPR000408 -
Enph12g0846 1092 SUPERFAMILY RCC1/BLIP-II 207 597 IPR009091 -
Enph12g0846 1092 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 415 425 IPR000408 -
Enph12g0846 1092 SUPERFAMILY PH domain-like 17 94 - -
Enph12g0846 1092 Pfam FYVE zinc finger 596 662 IPR000306 GO:0046872
Enph12g0846 1092 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 29 867 - -
Enph12g0846 1092 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 377 428 IPR000408 -
Enph12g0846 1092 MobiDBLite consensus disorder prediction 756 774 - -
Enph12g0846 1092 MobiDBLite consensus disorder prediction 756 789 - -
Enph12g0846 1092 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 544 595 IPR000408 -
Enph12g0846 1092 Coils Coil 803 837 - -
Enph12g0846 1092 FunFam PH, RCC1 and FYVE domains-containing protein 1 430 601 - -
Enph12g0846 1092 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 492 543 IPR000408 -
Enph12g0846 1092 SMART fyve_4 592 663 IPR000306 GO:0046872
Enph12g0846 1092 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 363 373 IPR000408 -
Enph12g0846 1092 PRINTS Chromosome condensation regulator RCC1 signature 481 499 IPR000408 -
Enph12g0846 1092 PRINTS Chromosome condensation regulator RCC1 signature 539 560 IPR000408 -
Enph12g0846 1092 PRINTS Chromosome condensation regulator RCC1 signature 379 393 IPR000408 -
Enph12g0846 1092 PRINTS Chromosome condensation regulator RCC1 signature 322 338 IPR000408 -
Enph12g0846 1092 PRINTS Chromosome condensation regulator RCC1 signature 363 379 IPR000408 -
Enph12g0846 1092 PRINTS Chromosome condensation regulator RCC1 signature 272 288 IPR000408 -
Enph12g0846 1092 ProSiteProfiles PH domain profile. 1 95 IPR001849 -
Enph12g0846 1092 Gene3D - 161 432 IPR009091 -
Enph12g0846 1092 Gene3D - 433 609 IPR009091 -
Enph12g0846 1092 FunFam PH, RCC1 and FYVE domains-containing protein 1 179 429 - -
Enph12g0846 1092 MobiDBLite consensus disorder prediction 120 200 - -
Enph12g0846 1092 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 256 266 IPR000408 -
Enph12g0846 1092 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 440 491 IPR000408 -
Enph12g0846 1092 MobiDBLite consensus disorder prediction 120 201 - -
Enph12g0846 1092 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 270 321 IPR000408 -
Enph12g0846 1092 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 610 668 IPR013083 -
Enph12g0846 1092 Gene3D - 13 101 IPR011993 -
Enph12g0846 1092 Pfam Regulator of chromosome condensation (RCC1) repeat 377 425 IPR000408 -
Enph12g0846 1092 Pfam Regulator of chromosome condensation (RCC1) repeat 491 540 IPR000408 -
Enph12g0846 1092 Pfam Regulator of chromosome condensation (RCC1) repeat 545 592 IPR000408 -
Enph12g0846 1092 Pfam Regulator of chromosome condensation (RCC1) repeat 270 318 IPR000408 -
Enph12g0846 1092 Pfam Regulator of chromosome condensation (RCC1) repeat 322 373 IPR000408 -
Enph12g0846 1092 Pfam Regulator of chromosome condensation (RCC1) repeat 439 486 IPR000408 -
Enph12g0846 1092 Pfam Transcription factor regulating root and shoot growth via Pin3 1010 1065 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0846 Enph-Chr12 15101754 15110762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0846 856 1068 Major Intrinsic Protein MIP AT1G31880 29.577 1.45e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0846 - - gmx:100783270 1727.99