Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0722 ATGGCTATAAAGCTGATGATAGCCAATGAGAAAACCAAAATGTCGATAAATGACAGGAAGAATGGTTGTGGTGACATGGATGATGGCCAAGCTTCATGGTCTCAACAGGTAGATGATTTGGAGCGAGAAGCAGTGATGGCTGGAAAGGAAGAGAATCGAATATTTGTTGGAGGTTTATCTTGGGACGTTACAGAGCGTCAACTCGAGCACGCCTTTGGTCGTTACGGCAAAATTATTGAATGCCAGATCATGTTAGAAAGAGATACTGGCCGTCCACGTGGATTTGGCTTTATTACCTTTTCAGATCGTAGAGGAATGGAGGATGCCATCAAGGAAATGCATGGACGTGAACTTGGTGATCGCATAATCTCAGTCAATAAGGCACAGCCTAAAATGGGAGGTGATGATTTAGACCATGGGTACAGGGGTGGCTACTCATCAGGTGGTAGGGGAAGCTATGGGGCTGGAGACAGGGTGGGACAGGATGACTGCTTCAAATGTGGGCGCCCAGGGCATTGGGCCAGAGATTGTCCTATGGCAGGTGGCCGTGCAGGGGATGGTGACTCATTTTCCTCACGTCCTAGGTTTGGAGGTGCTGGTAGCCATGGGGGTCGTGTTGTTGGTGAACGTGACCGCTACATGGATGACCGTTATGATGGTGGGCGCTATGGAGATCGGGATCGTATTGACAGCCGAGATCACAAATATGGTGGTCATGATCGCTATGGTAGTGACAGGTACCCAGCTGGTGGAGATCGTTTTGCAAGTGATAGATATGGTGGTGGTTCTGATCGTTACGCACAGAACAGTTATGGCAAAGATAGAGCCTTTGGCAAGTACAGTGGTCCACGTGTAGGTACTGATAGGTACGGAAGCGGAATGCCACCACGAGATGAAGGAAGGAGTTATAGGGGTAGGCCTGGTCCTTATGATCGCCCAAGCAGGGGTGGCCGTCCGTCTTCCTTTGACCGTTACTGA 978 0.4959 MAIKLMIANEKTKMSINDRKNGCGDMDDGQASWSQQVDDLEREAVMAGKEENRIFVGGLSWDVTERQLEHAFGRYGKIIECQIMLERDTGRPRGFGFITFSDRRGMEDAIKEMHGRELGDRIISVNKAQPKMGGDDLDHGYRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPMAGGRAGDGDSFSSRPRFGGAGSHGGRVVGERDRYMDDRYDGGRYGDRDRIDSRDHKYGGHDRYGSDRYPAGGDRFASDRYGGGSDRYAQNSYGKDRAFGKYSGPRVGTDRYGSGMPPRDEGRSYRGRPGPYDRPSRGGRPSSFDRY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0722 325 SMART rrm1_1 53 126 IPR000504 GO:0003723
Enph12g0722 325 SUPERFAMILY RNA-binding domain, RBD 49 156 IPR035979 GO:0003676
Enph12g0722 325 ProSiteProfiles Zinc finger CCHC-type profile. 164 178 IPR001878 GO:0003676|GO:0008270
Enph12g0722 325 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 123 IPR000504 GO:0003723
Enph12g0722 325 SMART c2hcfinal6 163 179 IPR001878 GO:0003676|GO:0008270
Enph12g0722 325 SUPERFAMILY Retrovirus zinc finger-like domains 148 182 IPR036875 GO:0003676|GO:0008270
Enph12g0722 325 PANTHER SRA STEM-LOOP-INTERACTING RNA-BINDING PROTEIN, MITOCHONDRIAL 49 317 - -
Enph12g0722 325 Gene3D - 24 162 IPR012677 -
Enph12g0722 325 Pfam Zinc knuckle 164 178 IPR001878 GO:0003676|GO:0008270
Enph12g0722 325 Gene3D - 163 200 - -
Enph12g0722 325 FunFam glycine-rich RNA-binding protein RZ1C 46 159 - -
Enph12g0722 325 MobiDBLite consensus disorder prediction 182 325 - -
Enph12g0722 325 MobiDBLite consensus disorder prediction 205 247 - -
Enph12g0722 325 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 52 130 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0722 Enph-Chr12 13715360 13721542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0722 54 133 C2H2 Transcription Factor Family AT2G19380 42.500 1.70e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0722 - - gmx:100809519 442.58