Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0688 ATGCGTGTCCCTTTCATTCTTTCCTTGTCTCATCCCTCCCACGTAGCCACAGCCCACAGCGTTGAAATCCAAGTCATATTCTTTTCATTATATAAAATTATCCTATACTCATTATCACTACAAATAATCCAGCTCTCCAACCACCTTTTAGAACTATATGCTTATCTGTTTCCCACACTCCATTTTTTTCCACCCCCTATTTATACATTCTTCCTCCCCCTCTCATCAGAACCAATCACAAGCGTTATGGCTTTCCTCCTTTTCTTCCTCTTCCTTCTTCTTTCTTCTTCTTCTGCTTGCGATCGCTGCATCTTCCAATCCAAAGCTACCTACTTCTCTAAATCCTCCGCTCTTTCTTCTGGGGCGTGCGGCTATGGTTCATTGGCCATGGGATTAAGTGGTGGACACCTCGCTGCTGCCGTGCCTTCTCTATACAAAGATGGAGTCGATTGCGGTGCCTGCTTTCGGATAAGATGCAAGAACCTGAGCCTGTGTACAAAAGCAGGAACTACAGTTGTCGTCACCGATCTCAACGAAAACAATCAAACTGACTTCGTGCTGAGCAACAGAGCCTTCTCGGCCATGGCTCTCGATGGTATGAGACAACAAATTTTGAAGCTTGGAATCGTTGACGTTGAATACGAGAGAGTACCATGTGTGTATAAAAACCAGAACTTGGCGGTGCGGGTGGAGGAATCAAGCAAGAAACCAGATTACTTGGCGATTAAATTTTTGTATCAAGGTGGGGAAACGGAGATAGTAGGGGTGGACGTAGCTGAGGTAGGGTCATCAAACTGGAGGTTCATGAACAGGAAGAATGGGGCAATATGGGACACAGACAGGGTACCGGCAGGGAGCATTGCAGCTGAGGATGTGACATCTGGGTATGACGGCAAGTGGATATGGGCACCAAAGGTTCTGCCTGCAGACTGGAAGACTGGCCTCATATACGACACTGGTGTTCAGATCACCGATATTGCCAAGCAGGATTGTTCTCCCTGCCACGATGGTGCTTCGTCATGA 1023 0.4692 MRVPFILSLSHPSHVATAHSVEIQVIFFSLYKIILYSLSLQIIQLSNHLLELYAYLFPTLHFFPPPIYTFFLPLSSEPITSVMAFLLFFLFLLLSSSSACDRCIFQSKATYFSKSSALSSGACGYGSLAMGLSGGHLAAAVPSLYKDGVDCGACFRIRCKNLSLCTKAGTTVVVTDLNENNQTDFVLSNRAFSAMALDGMRQQILKLGIVDVEYERVPCVYKNQNLAVRVEESSKKPDYLAIKFLYQGGETEIVGVDVAEVGSSNWRFMNRKNGAIWDTDRVPAGSIAAEDVTSGYDGKWIWAPKVLPADWKTGLIYDTGVQITDIAKQDCSPCHDGASS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0688 340 PANTHER EXPANSIN-B3 90 322 - -
Enph12g0688 340 CDD DPBB_EXLA_N 99 221 - -
Enph12g0688 340 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 120 224 IPR007112 -
Enph12g0688 340 PRINTS Expansin/Lol pI family signature 141 159 IPR007118 GO:0005576
Enph12g0688 340 PRINTS Expansin/Lol pI family signature 266 280 IPR007118 GO:0005576
Enph12g0688 340 PRINTS Expansin/Lol pI family signature 305 319 IPR007118 GO:0005576
Enph12g0688 340 PRINTS Expansin/Lol pI family signature 119 137 IPR007118 GO:0005576
Enph12g0688 340 PRINTS Expansin/Lol pI family signature 207 223 IPR007118 GO:0005576
Enph12g0688 340 SUPERFAMILY Barwin-like endoglucanases 89 222 IPR036908 -
Enph12g0688 340 Pfam Lytic transglycolase 139 214 IPR009009 -
Enph12g0688 340 Pfam Expansin C-terminal domain 227 308 IPR007117 -
Enph12g0688 340 SUPERFAMILY PHL pollen allergen 225 318 IPR036749 -
Enph12g0688 340 Gene3D - 220 324 IPR036749 -
Enph12g0688 340 Gene3D - 94 219 IPR036908 -
Enph12g0688 340 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 238 319 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0688 Enph-Chr12 13183635 13187191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0688 85 334 Expansin Gene Family AT3G45960 60.870 6.04e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0688 - - pcin:129293424 419.083