Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0532 ATGGAAGATGATGATGAAGTGGTTTCATGTTCTTCCGGTTCCGATGACGACGATGACTTCACCGGTGATTGTGAGCAGAGCTTTGATGAGAATGACCGATTAGAGGTTGACTTTTTTTCTCCTCCCGATGACGAGAGGAAATCGAAGAATATCGATGCTCTTGTGAGGGGAAACCTCGTTGTGAAGACACAATCATTGCTTCCACGAGTTCTTTCTGTAACGCAAGGAGCAGCCTTTTGTAGAAAACCTTTTAAGCCTCCCAGCTCCAATGGTTACAATAATGGAAATGAAGAGCTTACACGTCGCCTATGGGCTCGGAAAAGGTTTGTCCCTTGGGGCTCTACCAGACCGGTGTTGGTGGCAATTACCAACCGGTTAAATGCACCCATAAACGTTGAACAAGATGTTGTTCAGGAGGAAGTGTCTTTGCCACCCGAGGTCGATCCTCTAGTATTATGGCAGCCTGAGGACTATGAGCATCAGAGTCGTAATTTAACGCCAATAGCAGTGGACCCGTTGCTTGTTCGTTTTCTTAGACCACACCAGAGCGCACTGCATGATTCTGATACCGTCTATCATCTCACTATTGATTATGTCTTCCTTCTCCAATATCTGAGTGCAAGTGCATTCTTGGTGTTTAAGCTAAGAAATAAACATTTTGCTCACACTTTCGATGCAGAGAAGGAGTTCAGTTTATGTTTGAATGGCTATTTAGCTCAGCAAATATTCATGGGTGCATCCTGGCAGATGATATGGGGCAATTTGGGGAAGACGTTGCAGTCAATCGCACTACTGTACACACTTCTTTGTCAAGGGTTTGATGGGAAGCCAATGGTTAGAAAAGCCATCATTGTGACCCCTACCAGCCTTGTAAGTAATTGGGAAGCTGAAATTAAGAAGTGGGTTGGAGAAAGAGTTCGTCTCGTCTCTCTGTATGAAAACACAAGAGATGATGCCGTCTCTGGGATCGACAATTTTACGAATCCCCAAGGCTCTTTACAGGTGCTGGTTGTTTCATATGAGACATTCCGACTGCATTCATCGAAATTTAGCCATAGTGATTCTTGTGACCTACTTATATGTGATGAGGCTCACAGGCTGAAAAATGATCAGACAGCAACAAATCGGGTGAGGATTTATGTTCAATCATCTTTACGCATTACGAGTAACAATTCTAACATTTTGAGAAGTTTTGTCTGCTACCTGCAGAATGACCTAGGGGAATTCTTTGCAATGATTAACTTCACTAATCCCGGGATATTGGGTGATATTACACATTTTCGCCGTTACTTTGAGGACAAGCCAGTGTCTGAAGCACCTTTTGAGGACAATTTTACCTGGATCATGAAGGGACCAATTATTTGTGGAAGAGAACCTAATGCCTCGGCTGATGAGAAGAAGCTAGGTGCTGAACGATCTGCAGAGTTAAGCGCGAAAGTTAACCAGTTTATATTGAGAAGAACCAATGCATTATTATCAAACCACTTACCACCAAAGGTTAAACGGGCAATTGTTGAAGAAGTAAAGCAATCGAAGATATTAGCCTACATAACAGTTCTCAAAAAGCTGTGCAACCATCCAAAGCTTATTTATGATACTATACGAAGCGGGAGTCCTGGAACTTCGGGTTTTGAGGACTGCATTCGATTCTTTCCACCAGAAATGTTATCTGGAAGATCTGGCTCATGGACTGGCGGAGATGGAGCTTGGATTGAGTTGTCAGGAAAAATGCATGTCTTAGCGAGACTGCTTGCTCAGTTGCGGCACAGGACCAATGATCGTATCGTTCTTGTCTCGAACTACACTCAGACTCTGGATCTTTTCGCTCAACTGTGTCGGGAACGAAGGTACCCACACTTGAGGCTTGATGGTACAACTTCAATCAGTAAAAGGCAGAAGTTAGTAAATCGCTTCAATGACCAATCAAAGGACGAATTCGTTTTTCTCTTGAGCAGCAAGGCTGGTGGCTGTGGCCTCAATTTAATTGGAGGAAATCGATTAATCCTATTCGATCCTGATTGGAACCCAGCAAATGACAAACAAGCTGCAGCAAGAGTTTGGAGGGATGGACAGAAGAAAAGAGTGTACATATATAGATTTTTGAGTGCGGGGACAATAGAGGAAAAGGTCTACCAGCGTCAGATGTCCAAAGAAGGGTTACAAAAAGTCATTCAGCAAGAGCAAACAGATAACCTTGAGACACTGGGCAACTTTCTTTCGACAGAGGTCCTCCGCGATCTGTTCACATTTCATGAGAATGTCAAGTCAGAGATTCATGAAAGGATGCATTGCACTCGGTGCCAGACATTTGATGATGATGATGGGAAATATGAAGCTCAAACAACGGGTAATGGTGAATTTGATGATGAAGCCTCTGATGATATTGGTGGATTTGCAGAAATTGCCGGCTGTATGCACAAGTTAAGGAAATCTGAAAAGCAGGTGGGTACCCCCTTGGAAGAAGATCTGTGTAGATGGGGCCATCATTTCTTTCGAACGTCTGTACCAGATGCTATCCTTCAGGCTTCAGCCGGAGATGAGGTGACTTTTGTTTTCACAAACCAGGTTAATGGAAAGCTGACACCGATTGATTCAACTGTCGGTTCAGAGCGACAGCATGAGGAACCAAGCCAGGGACTTATCCAGCCAGAGCGGAACGTCAAACAAAGTTGCTTTCTTTCTTTACATCAGAAATCATCTTGTTCTCTCAAGCCTTCAATGAGGCCAGCGTTGAGTTCTGTTAGAACTAACAAAAATATATCTCTACGAGCAGCTATAAAGTCCGAAAGCTCCATTGTAAATAAATTACCACAGAAAAGATCACATCAAGCTTGTGGGGATGATTAA 2847 0.4341 MEDDDEVVSCSSGSDDDDDFTGDCEQSFDENDRLEVDFFSPPDDERKSKNIDALVRGNLVVKTQSLLPRVLSVTQGAAFCRKPFKPPSSNGYNNGNEELTRRLWARKRFVPWGSTRPVLVAITNRLNAPINVEQDVVQEEVSLPPEVDPLVLWQPEDYEHQSRNLTPIAVDPLLVRFLRPHQSALHDSDTVYHLTIDYVFLLQYLSASAFLVFKLRNKHFAHTFDAEKEFSLCLNGYLAQQIFMGASWQMIWGNLGKTLQSIALLYTLLCQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVRLVSLYENTRDDAVSGIDNFTNPQGSLQVLVVSYETFRLHSSKFSHSDSCDLLICDEAHRLKNDQTATNRVRIYVQSSLRITSNNSNILRSFVCYLQNDLGEFFAMINFTNPGILGDITHFRRYFEDKPVSEAPFEDNFTWIMKGPIICGREPNASADEKKLGAERSAELSAKVNQFILRRTNALLSNHLPPKVKRAIVEEVKQSKILAYITVLKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGDGAWIELSGKMHVLARLLAQLRHRTNDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGTTSISKRQKLVNRFNDQSKDEFVFLLSSKAGGCGLNLIGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDNLETLGNFLSTEVLRDLFTFHENVKSEIHERMHCTRCQTFDDDDGKYEAQTTGNGEFDDEASDDIGGFAEIAGCMHKLRKSEKQVGTPLEEDLCRWGHHFFRTSVPDAILQASAGDEVTFVFTNQVNGKLTPIDSTVGSERQHEEPSQGLIQPERNVKQSCFLSLHQKSSCSLKPSMRPALSSVRTNKNISLRAAIKSESSIVNKLPQKRSHQACGDD 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0532 948 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 579 736 IPR001650 -
Enph12g0532 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 767 IPR027417 -
Enph12g0532 948 Gene3D - 252 486 IPR038718 -
Enph12g0532 948 SMART ultradead3 230 427 IPR014001 -
Enph12g0532 948 MobiDBLite consensus disorder prediction 1 29 - -
Enph12g0532 948 Pfam Helicase conserved C-terminal domain 581 689 IPR001650 -
Enph12g0532 948 SMART helicmild6 606 690 IPR001650 -
Enph12g0532 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 487 IPR027417 -
Enph12g0532 948 PANTHER SNF2/RAD54 FAMILY MEMBER 255 830 - -
Enph12g0532 948 Gene3D - 568 769 IPR027417 -
Enph12g0532 948 FunFam DNA repair and recombination protein RAD54-like 568 736 - -
Enph12g0532 948 Pfam SNF2-related domain 255 522 IPR000330 GO:0005524|GO:0140658
Enph12g0532 948 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 255 397 IPR014001 -
Enph12g0532 948 Gene3D - 501 753 - -
Enph12g0532 948 CDD SF2_C_SNF 573 701 - -
Enph12g0532 948 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0532 Enph-Chr12 11841033 11848679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0532 570 730 RAD5 or RAD16-like Gene Family AT5G43530 36.420 7.69e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph12g0532 SNF2_N 6.8e-24 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0532 K10875 - qsa:O6P43_011711 1145.18