Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0522 AGTAAGAGTCGTGTTTGTGTCCTTTCCAAACCCAAACACAACACAACACAACACAACACAACACAACACACAATCCCCCCCCTCTCTCCTCCTTCCTTCCTTCTCTCTCGCCTCGCTGTCAGCAACTTCCATTGTTGGAGACGGGAAGGTGAAGAGAGAACACATACGAAGAGTGATAAACACAGAAAGCAACTGAGGACACACAACTTGAACAGCCTTATGGCCCAGCCAACTTCCGACGCCGCCGATCTGAATCAGCAGCAGCAGCAGCAATGGACGCAGCCGCATCAGTATCCCCAACAATGGATGACCATGCAGTATCCAGCTTCGGCTATGGCGATGATGCAGCACCAGATGATGATGTATCCGCCGCATTACATCCCTTACGTTCACCAATATTATCAGCCGCCATACCACCACCCGCACCTGAAGCAGCCGCCGCCACACCCGCAGCATCACCAGCAGAGCTCCAACGATGAGATCAGGACGATCTGGCTCGGTGACCTTCATCATTGGATGGACGAGAACTACCTTAATAGCTGCTTTGCTTACACAGGCGAGGTATATACTGTCAAGGTAATACGAAATAAGCAAACTGGTCAGTCAGAGGGATATGGATTTGTTGAGTTTTGTACACGTGCAACAGCTGAGAAAGTCTTGCAGAGCTATAATGGTACTATGATGCCAAATACAGATCAGCCATTTCGCTTAAATTGGGCTACATTCAGTTCTGGTGATAGGCGATCTGATGCTAGTTCAGATTACTCTATATTTGTTGGGGACTTGGCTGTAGATGTTACTGATGCTATGCTTCAGGAAACCTTTGCAAACAGATATTCATCTGTTAAGGGAGCAAAAGTTGTTATTGATTCAAACTCTGGCCGTTCAAAAGGTTATGGTTTTGTAAGGTTTGCTGATGAAAATGAGAGATCCAGGGCACTGACTGAAATGAATGGTCATTATTGTTCAAGTAGGCCAATGCGAATAAGTATTGCAACTCCTAAGAAATCATATGGACATCAACAACATTACTCTTCACAAGGCTTAAGGGACTCTTTTCAAACAGTTGTGGCTTATATATTTATGCCTCTGTGGTATTGGCTAATGGATATACTTCTAATGGTGCTATGGCCCATGGTTCCCAGTCTGAATGGGACTCTTCTAACACAACTAAAGAACGCAGAGGAGGCAATTCAGGCATTGAATGGGACAGTAATAGGGAAGCAGACCGTTCGTCTTTCTTGGGGTCGCAGTCCAGGAAATAAGCATTGGAGGATGGATTCCAATGGAGGGCAAGGTTATGGTGGAAGACAGCATCAGGCATGA 1326 0.46 SKSRVCVLSKPKHNTTQHNTTQHTIPPLSPPSFLLSRLAVSNFHCWRREGEERTHTKSDKHRKQLRTHNLNSLMAQPTSDAADLNQQQQQQWTQPHQYPQQWMTMQYPASAMAMMQHQMMMYPPHYIPYVHQYYQPPYHHPHLKQPPPHPQHHQQSSNDEIRTIWLGDLHHWMDENYLNSCFAYTGEVYTVKVIRNKQTGQSEGYGFVEFCTRATAEKVLQSYNGTMMPNTDQPFRLNWATFSSGDRRSDASSDYSIFVGDLAVDVTDAMLQETFANRYSSVKGAKVVIDSNSGRSKGYGFVRFADENERSRALTEMNGHYCSSRPMRISIATPKKSYGHQQHYSSQGLRDSFQTVVAYIFMPLWYWLMDILLMVLWPMVPSLNGTLLTQLKNAEEAIQALNGTVIGKQTVRLSWGRSPGNKHWRMDSNGGQGYGGRQHQA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0522 441 FunFam Polyadenylate-binding protein RBP47B 243 345 - -
Enph12g0522 441 Gene3D - 161 241 IPR012677 -
Enph12g0522 441 SMART rrm1_1 256 330 IPR000504 GO:0003723
Enph12g0522 441 SMART rrm1_1 163 238 IPR000504 GO:0003723
Enph12g0522 441 MobiDBLite consensus disorder prediction 1 29 - -
Enph12g0522 441 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 257 327 IPR000504 GO:0003723
Enph12g0522 441 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 164 231 IPR000504 GO:0003723
Enph12g0522 441 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 255 334 IPR000504 GO:0003723
Enph12g0522 441 SUPERFAMILY RNA-binding domain, RBD 393 438 IPR035979 GO:0003676
Enph12g0522 441 SUPERFAMILY RNA-binding domain, RBD 239 350 IPR035979 GO:0003676
Enph12g0522 441 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 151 422 - -
Enph12g0522 441 CDD RRM2_SECp43_like 254 333 - -
Enph12g0522 441 MobiDBLite consensus disorder prediction 138 158 - -
Enph12g0522 441 FunFam Polyadenylate-binding protein RBP47B 161 241 - -
Enph12g0522 441 CDD RRM1_SECp43_like 163 243 - -
Enph12g0522 441 Gene3D - 242 349 IPR012677 -
Enph12g0522 441 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 162 242 IPR000504 GO:0003723
Enph12g0522 441 SUPERFAMILY RNA-binding domain, RBD 133 245 IPR035979 GO:0003676
Enph12g0522 441 MobiDBLite consensus disorder prediction 419 441 - -
Enph12g0522 441 MobiDBLite consensus disorder prediction 8 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0522 Enph-Chr12 11737761 11743669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0522 138 336 Eukaryotic Initiation Factors Gene Family AT4G34110 24.171 1.45e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0522 - - gmx:100814564 423.705