Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0325 ATGATGCAGCCCGGACCTGGCATGGCTCCCCCAAACATGGGTCAGCAACCTAACCAGCAATACCAGCAGCAGCAGCAACCCTATATGATGATGCCGCCGCAGGCCCAGGCGCCGCCTATGTGGGCTCCCTCTGCCCAGCCCCCACCGCAGCAGTCTGTTGCTCCTCCTCAGCCCACCCAACACGTTCAGCCGAATAGCGCCGATGAGGTCCGTACTCTTTGGATCGGTGATTTGCAGTACTGGATGGATGAGAACTATCTCTATACCTGTTTTGCGCATACCGGCGAGGTGTCTTCAGTGAAAGTTATTCGGAATAAGCAAACTAATGTATCCGAAGGTTATGGGTTTATTGAGTTTTTCTCCCGTGCTGCTGCGGAGAGAATTCTTCAAACATATAATGGTACGATCATGCCTAACGGTGGGCAAAGCTTCAGGTTGAATTGGGCAACTTTTAGTGCGGGCGAGAGGCGTCATGATGACTCTCCAGATCACACTATATTTGTTGGAGACTTGGCTGCAGATGTCACAGATTACCTGCTGCAGGAGACATTTCGGGCTAGATATCCCTCAGTTAAGGGTGCAAAAGTTGTGATTGATAGGCTCACTGGGCGGACTAAGGGTTATGGTTTTGTCAAGTTTGGAGATGAGAGTGAACAAGTGCAAGCTATGAATGAGATGCAAGGGGTTCTTTGTTCGACAAGACCCATGAGAATTGGACCAGCCACAAACAAAAACGTTGGAGGACAGCAAAAAGGTTTTTCTCATCAATTTTTATGTTCTGGCCTATTGTTGGAAATGGTGTCAGGAGGCTCTGTCATCTCGGAGCCTGGAACTATTTTCAGCCGAAATGGTTACCATTTTAGTGCATGGCCTTGCTTAGGTCAGTTTCCCGTTTATGCTCAGCCAGATCCAAACCAGTATGGTGGATATTATGGCTATGCTCAAGGGTACGAGAATTATGGATACCCTCCTGCTGCTACACAGGATCCCAACATGTATGGTAGTTATCCGGGATATGCCAACTATCAACCACCACAGCAACAACAGCAAATGGGATATAGCTAA 1065 0.4845 MMQPGPGMAPPNMGQQPNQQYQQQQQPYMMMPPQAQAPPMWAPSAQPPPQQSVAPPQPTQHVQPNSADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTNVSEGYGFIEFFSRAAAERILQTYNGTIMPNGGQSFRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSVKGAKVVIDRLTGRTKGYGFVKFGDESEQVQAMNEMQGVLCSTRPMRIGPATNKNVGGQQKGFSHQFLCSGLLLEMVSGGSVISEPGTIFSRNGYHFSAWPCLGQFPVYAQPDPNQYGGYYGYAQGYENYGYPPAATQDPNMYGSYPGYANYQPPQQQQQMGYS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0325 354 MobiDBLite consensus disorder prediction 32 55 - -
Enph12g0325 354 CDD RRM1_SECp43_like 72 152 - -
Enph12g0325 354 CDD RRM2_SECp43_like 163 242 - -
Enph12g0325 354 MobiDBLite consensus disorder prediction 1 66 - -
Enph12g0325 354 SUPERFAMILY RNA-binding domain, RBD 41 152 IPR035979 GO:0003676
Enph12g0325 354 FunFam Polyadenylate-binding protein RBP45 10 155 - -
Enph12g0325 354 FunFam Polyadenylate-binding protein RBP45C 156 248 - -
Enph12g0325 354 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 151 IPR000504 GO:0003723
Enph12g0325 354 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 166 229 IPR000504 GO:0003723
Enph12g0325 354 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 138 IPR000504 GO:0003723
Enph12g0325 354 Gene3D - 156 256 IPR012677 -
Enph12g0325 354 Gene3D - 8 155 IPR012677 -
Enph12g0325 354 SUPERFAMILY RNA-binding domain, RBD 157 254 IPR035979 GO:0003676
Enph12g0325 354 MobiDBLite consensus disorder prediction 12 31 - -
Enph12g0325 354 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 61 252 - -
Enph12g0325 354 SMART rrm1_1 72 147 IPR000504 GO:0003723
Enph12g0325 354 SMART rrm1_1 165 239 IPR000504 GO:0003723
Enph12g0325 354 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 164 243 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0325 Enph-Chr12 9803594 9807525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0325 73 245 Eukaryotic Initiation Factors Gene Family AT1G22760 26.554 5.06e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0325 - - gmx:100796848 363.614