Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0155 ATGGTTCTCTCCAACAAGAAGCTTAAGCAGAAGCTGAAGACGGAGTTTGCTCAGTCTCAGTCCGCAAATCCAGATTGCTCTCTCAAAAATCTTCTGGATTCGACCCCGAAAGTCCGATTATCAAAGAGAGAGAAACGCAGAAAGGTTCGCTCTTTGCAACAACCTGAGGCTACCCAAGAAGTTGGCGATGGTCGTAGCGTTGATGAGAACAAAGAAGACGAGGGAACCAAGAAGAAGAGCAAAAAAAGGAAGAGGAAGAATGAGGACAACGGCGAGGCAAATGGGGTTGTAAACGATGCGAAGAAATCGGAAAAGAAGCGTAATAAAAAGAAGAAGAAGAAGAAGAAGAAGGCTAAAACAGCTAAGGAAAAGGATGCTAATCCTGGAGATGAAAAGCTAGAGACTTCAGAGTTAACTAAGAGTAATGACAGTGAACAAAGTGGTGATGTTCCAACAAAAGTTTATGTTGGAGGAATTCCCTATTATTCAACCGAGGATGATATTCGAAGCTATTTTGAAGGCTGTGGCACAATAACTGAAATTGATTGCATGAAGTTCCCTGAGACTGGAAAGTTTCGTGGGATTGCCCTTATTAGTTTCAAGACTGAAGCTGCTGCAAAACGAGCCTTGGCTCTTGATGGATCTGACATGGGAGGACTCTTTCTTACAATTCAACCTTATAAAACAACTCGAACTAGTAAAACATCTGATTTCGCCCCAAAACCCATGGACGGCTACAACAGAATCTATGTTGGAAATTTGCCATGGGATATAACTGAGGACCAGTTAAAGACACTGTTCTCAAACTGCACCATATCATCCATACGTTTTGGAATGGACAAGGAGACAGGAGAATTCCGAGGGTATGCTCATGTTGATTTTGCTGATAGTCAATCGGTGAAAACAGCTCTTATATTGGACCAAAAGGTGTTGTGTGGGAGACCCGTCAGGATAACTTGTGCAGTTCCTCTAAAGAAGCAATGGAACCAAGCAACCAACGTGCCTATGAGTGAAAAAGTTGATAGCGAGAAGTCAGGTTCCACAGGAAGTGGCAAAATTAAGAGGAGGACATGCTTTGAATGTGGAGAAAAGGGGCACATTTCTTCTGCATGCCCAAAGAAACAGAATGTTGATTCAAATACAAGCTAG 1149 0.4256 MVLSNKKLKQKLKTEFAQSQSANPDCSLKNLLDSTPKVRLSKREKRRKVRSLQQPEATQEVGDGRSVDENKEDEGTKKKSKKRKRKNEDNGEANGVVNDAKKSEKKRNKKKKKKKKKAKTAKEKDANPGDEKLETSELTKSNDSEQSGDVPTKVYVGGIPYYSTEDDIRSYFEGCGTITEIDCMKFPETGKFRGIALISFKTEAAAKRALALDGSDMGGLFLTIQPYKTTRTSKTSDFAPKPMDGYNRIYVGNLPWDITEDQLKTLFSNCTISSIRFGMDKETGEFRGYAHVDFADSQSVKTALILDQKVLCGRPVRITCAVPLKKQWNQATNVPMSEKVDSEKSGSTGSGKIKRRTCFECGEKGHISSACPKKQNVDSNTS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0155 382 Coils Coil 101 121 - -
Enph12g0155 382 SMART rrm1_1 248 319 IPR000504 GO:0003723
Enph12g0155 382 SMART rrm1_1 153 225 IPR000504 GO:0003723
Enph12g0155 382 MobiDBLite consensus disorder prediction 121 139 - -
Enph12g0155 382 Gene3D - 234 331 IPR012677 -
Enph12g0155 382 MobiDBLite consensus disorder prediction 15 30 - -
Enph12g0155 382 Gene3D - 334 382 - -
Enph12g0155 382 Gene3D - 92 225 IPR012677 -
Enph12g0155 382 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 247 323 IPR000504 GO:0003723
Enph12g0155 382 Pfam Zinc knuckle 356 373 IPR001878 GO:0003676|GO:0008270
Enph12g0155 382 SUPERFAMILY RNA-binding domain, RBD 240 326 IPR035979 GO:0003676
Enph12g0155 382 SUPERFAMILY Retrovirus zinc finger-like domains 344 377 IPR036875 GO:0003676|GO:0008270
Enph12g0155 382 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 152 229 IPR000504 GO:0003723
Enph12g0155 382 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 249 316 IPR000504 GO:0003723
Enph12g0155 382 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 154 220 IPR000504 GO:0003723
Enph12g0155 382 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 71 220 - -
Enph12g0155 382 SUPERFAMILY RNA-binding domain, RBD 146 230 IPR035979 GO:0003676
Enph12g0155 382 CDD RRM1_PHIP1 154 225 IPR034361 -
Enph12g0155 382 MobiDBLite consensus disorder prediction 104 120 - -
Enph12g0155 382 MobiDBLite consensus disorder prediction 62 77 - -
Enph12g0155 382 MobiDBLite consensus disorder prediction 15 151 - -
Enph12g0155 382 SMART c2hcfinal6 357 373 IPR001878 GO:0003676|GO:0008270
Enph12g0155 382 ProSiteProfiles Zinc finger CCHC-type profile. 358 373 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0155 Enph-Chr12 7457841 7462186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g0155 152 321 Eukaryotic Initiation Factors Gene Family AT3G16380 28.729 4.12e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0155 - - gmx:100814693 435.647