Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph11g1377 ATGCCTCCGAGGACGGTGAAGAGAGGGGCTGCAGCAGCGGCGCGGAGAGGGGGGAGAACTTCCAAAGGAACGCCGTCTAAGGCTGCTCAGAATCAGCAGAATCATGAGGCTGTTGAAGAGGTTGTGAAGCATGAGGAGAAGACGGTCGTCGAGGAGAAGCCGGTTGTTGAAGAAAAACCTGTTGGAGTGAAGCAAGTGAGTATTGATATGAATCAGATCGCTTTTGATATCAACCAAGTTGCTTCAGAGGCCGAAGAAGCGAATCTGGTCACTAATGGATTGGCTGCTGCAAAAAACGATGAAGAGGAAGTTAAGGAGTCATTAGATGAATATGAAAAAGATGAACGCTTAGATCTGGAGGATAATGATCCAGAGTATGAACCTGAGGAGTATAGTGGAGTTGATTATGATGAAAGAGCAATTGAGCATGATGACGTTCAGGAGGTAGGAGATGAGATAGAGGAAGAACCTGAAGAGAATATAGGTGAAGAAGAGGGTGATATAGTGGAGGAGGAAGTGGAAGATGTTCATGGAGAACTTGAGGGTGAAGAGGATGATGAGCATCCTGGAGAGGAGCATGAGCATGCAGAGATGGCTGATGTAGAGGAAGACGAACACCATGAAGGTCTGAAGGAGAGGAGGAAGCGCAAGGAATTTGAAGTATTTGTTGGGGGCTTAGATAAAGATGCTACTGAGGATGATCTCAGGAAGGTTTTTAGTGCAGTTGGCGAGGTTACTGAAGTGAGGCTTATGATGAATCCTCAGACTGAAAAGAATAAGGGTTTTGCATTCTTGCGATTTGCAACTGTGGAACAAGCAAAACGAGCTGTCACAGAGCTAAAAAATCCAGTGATTAATGGCAAACAATGCGGTGTTACCCCCAGTCAGGACAGTGATACCTTATTTTTGGGTAACATATGCAAAACATGGACAAAGGAAGCTTTAAAGGAGAAGTTAAAGCATTATGGAGTTGATAATGTGGAGGATTTGACTTTAGTAGAAGATAGTAATAATGAGGGATTGAACCGTGGATTTGCATTTTTAGAATTTTCGTCTCGATCAGATGCTATGGATGCTTTTAAGCGATTGCAGAAAAGAGATGTTGTATTTGGAGTTGATAGGCCTGCAAAGGTTTCCTTTGCAGATTCCTTTATTGATCCGGGTGATGAGATTATGGCGCAGGTTAAAACTGTATTCGTTGATGGTCTTCCTCCTTCATGGGATGAAGATCGCGTGCGAGTTCTTCTTAAGAGATATGGGGAGATTGAGAAGATTGAGCTTGCTAGAAACATGCCTTCTGCCAAGAGGAAGGACTTTGGATTCGTTACATTTGACACCCATGATGCTGCTGTGGCATGTGCCAAAAGCATTAATAATTCTGAGTTAGGTGAAGGAGATAGTAAGGCAAAAGTTAGAGCTAGATTATCAAGACCACTTCAGAGAGGCCATGGAAAACATGTTGGGCGTGGGGACTTTCGGTCTAGTCGTGCTTCTGGAAGAGTTACTAGGCCATCATGGAGTCGACTGGTACCTCGTAGTTTATCTGGTCGTGGGGTAAGGGGCATTAGTAGTCGCGTCCCACCAGCCAGGCCTGTTAGTGTGAGGGATAGACGTCCAGCCATGCCGATGACAGTAAGAGCTAGGCCGATGGCTCCTCCGCCTAGATCCTATGATAGGAGACCAGCTGTTCCTGCATATCCAAAAGGTAGCATGAAGAGAGATTATGGTCGGCGTGAGGATTTGCCACCACCAAGAAGTAGAGTACCTGCAGATTACAGCTCTAGAGTGCCCTCTGAGAGACGCCAATCTTATAGGGATTATCCAGCCCGGGGCCCTACTTACTCTGACCTTCCGAGAAGTACTACATCCCGTGTTGCACCTAGGAGGGGTTATGTGGATGATGGCTATGGCCAAAGATTTGAGAGGCCTCCACCTCCTCCACCTCCTCATCCAAGCTACCGTGAAGGACGCTCACGTGATTATGAAACCATCTCTGGCTCTAAACGCCAATATGCTGCCATAGATGATGTTCCTCCACGATATGCAGACAGTGGTGCTCGCCAATCAAGAGCTCGGTTGGACTATGACTATGGTGGTAGTGCTTCACAGTATGGAGATGCTTATGGTGATAGACTTGGGAGATCTAGTATGGGCTATGGTGGCAGTAGGAGTTCTATGTCAAATCAGGACTCACATGGGATGTATAGCAGTCGGCAGGGCATGAGTTACAGTGGAGGTGGTTCTTTCGGCAGTGGTGATGTTGGTGGCATGTACTCCAGTTATGGTGGTGATTATATGTCTCGTGGAAATGATGTGTTGGTGGTGGCTCATACTCATCACTTTATTCTGGCAGAGGTGTGGGTGGTAGTAGCAGTTACATGGGTGGTAGTGGGTCTGGGTCTTATTATTAAGATGTGA 2418 0.4636 MPPRTVKRGAAAAARRGGRTSKGTPSKAAQNQQNHEAVEEVVKHEEKTVVEEKPVVEEKPVGVKQVSIDMNQIAFDINQVASEAEEANLVTNGLAAAKNDEEEVKESLDEYEKDERLDLEDNDPEYEPEEYSGVDYDERAIEHDDVQEVGDEIEEEPEENIGEEEGDIVEEEVEDVHGELEGEEDDEHPGEEHEHAEMADVEEDEHHEGLKERRKRKEFEVFVGGLDKDATEDDLRKVFSAVGEVTEVRLMMNPQTEKNKGFAFLRFATVEQAKRAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGLNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPPSWDEDRVRVLLKRYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVACAKSINNSELGEGDSKAKVRARLSRPLQRGHGKHVGRGDFRSSRASGRVTRPSWSRLVPRSLSGRGVRGISSRVPPARPVSVRDRRPAMPMTVRARPMAPPPRSYDRRPAVPAYPKGSMKRDYGRREDLPPPRSRVPADYSSRVPSERRQSYRDYPARGPTYSDLPRSTTSRVAPRRGYVDDGYGQRFERPPPPPPPHPSYREGRSRDYETISGSKRQYAAIDDVPPRYADSGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGSRSSMSNQDSHGMYSSRQGMSYSGGGSFGSGDVGGMYSSYGGDYMSRGNDVLVVAHTHHFILAEVWVVVAVTWVVVGLGLIIKM 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph11g1377 805 Coils Coil 94 117 - -
Enph11g1377 805 FunFam RNA recognition water-stress protein1 386 507 - -
Enph11g1377 805 CDD RRM_SF 301 379 - -
Enph11g1377 805 SUPERFAMILY RNA-binding domain, RBD 215 297 IPR035979 GO:0003676
Enph11g1377 805 MobiDBLite consensus disorder prediction 113 132 - -
Enph11g1377 805 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 152 299 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 571 585 - -
Enph11g1377 805 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 219 297 IPR000504 GO:0003723
Enph11g1377 805 SMART rrm1_1 300 379 IPR000504 GO:0003723
Enph11g1377 805 SMART rrm1_1 397 472 IPR000504 GO:0003723
Enph11g1377 805 SMART rrm1_1 220 293 IPR000504 GO:0003723
Enph11g1377 805 SUPERFAMILY RNA-binding domain, RBD 298 463 IPR035979 GO:0003676
Enph11g1377 805 FunFam Heterogeneous nuclear ribonucleoprotein Q 300 382 - -
Enph11g1377 805 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 221 289 IPR000504 GO:0003723
Enph11g1377 805 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 398 463 IPR000504 GO:0003723
Enph11g1377 805 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 301 367 IPR000504 GO:0003723
Enph11g1377 805 MobiDBLite consensus disorder prediction 715 736 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 147 166 - -
Enph11g1377 805 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 396 478 IPR000504 GO:0003723
Enph11g1377 805 Gene3D - 300 382 IPR012677 -
Enph11g1377 805 Gene3D - 386 504 IPR012677 -
Enph11g1377 805 MobiDBLite consensus disorder prediction 189 212 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 516 688 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 1 41 - -
Enph11g1377 805 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 299 383 IPR000504 GO:0003723
Enph11g1377 805 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 12 723 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 546 560 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 99 140 - -
Enph11g1377 805 Coils Coil 27 47 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 718 736 - -
Enph11g1377 805 CDD RRM_SF 221 292 - -
Enph11g1377 805 CDD RRM_SF 398 463 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 177 212 - -
Enph11g1377 805 MobiDBLite consensus disorder prediction 478 504 - -
Enph11g1377 805 Gene3D - 142 299 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph11g1377 Enph-Chr11 23042318 23049856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph11g1377 214 477 Eukaryotic Initiation Factors Gene Family AT1G49760 23.746 2.55e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph11g1377 - - gmx:100779340 1040.02