Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph11g1375 ATGAAATCAGCGTTCTTTCCTTCTGTTGCACTTGTAGCAACACAGATTTTGAGGGCTGTGGCACAGGAATCTGGAATTTTCTTTTACCTATTCCAATGGTTATTAGTTGTATCAAACCACGAAGAGAAAGTTAAGGAGTCATTAGATGAATATGAGAAAGATGAGCGCTTAGATCTGGAGGATAATGATCCAGAGTATGAACCTGAGGAGTATGGTGGAGTTGATTATGATGAGAGGACAATTGAGCATGATGATGTTCAGGAGTATGGTGGAGTTGATTATGATGAGAGGGCAATTGAGCATGATGATGTTCAGGAGGTAGGAGATGAGATAGAGGAAGAATCTGAAGAGAATATAGGTGAAGAAGAGGGTGATATAGTGGAGGAGGAAGTGGAAGATGTTCATGGAGATCTTGAGGGTGAAGAGAATGATGAGCATACTGGAGGGGAGCATGAGCATGCAGAGATGACTGATGTAGAGGAAGATGAACACCATGAAGGTCTGAAGGAGAGGAGGAAGCGCAAAGAATTTGAAGTATTTGTTGGGGGCTTAGATAAAGATGCTACTGAGGATGATCTCAGGAAGGTTTTTAGTGCAGTTGGCAAGGTTACTGAAGTGAGGCTTATGATGAATCCTCAGACTGAAAAGAATAAGGGTTTTGCATTCTTGCGATTTGCAACTGTGGAACAAGCAAAACGAGCTGTCACAGAGCTAAAAAATCCAGTGATTAATGGCAAAAAATGCGGTGTTACCCCCAGTCAGGACAGTGATACCCTCTTTTTGGGTAACATATGCAAAACATGGACAAAGGAAGCTTTAAAGGAGAAGTTGAAGCATTATGGAGTTGATAATGTGGAGGATTTGACTTTAGTAGAAGATAGTAATAATGAGGGATTGAACCGTGGATTTGCATTTTTAGAATTCTCATCTCGATCAGATGCTATGGATGCTTTTAAGCGATTGCAGAAAAGAGATTTTGTGTTTGGAGTTGATAGGCCTGCAAAGGTTTCTTTTGCAGATTCCTTTATTGATCCGGGTGATGAGATTATGGCGCAGGTTAAAACTGTCTTCATTGATGGTCTGCCTCCTTCATGGAATGAGGATCATGTGCGGGTTCTTCTCAAGAGATATGGGGAGATTGAAAAGATTGAGCTTGCCAGAAACATGCCTTCTGCCAAGAGGAAGGACTTTGGATTTGTTACATTTGACACCCATGCTGCTGCTGTGACATGTGCCAAAAGCATTAATAATTCTGACTTAGGCGAGGGGGATAGTAAGGCAAAAGTTAGAGCTAGATTATCGAGACCACTTCAGAGAGGTCATGGAAAACATGTTGGACGTGGGGACTTTCGGTCTAGTCATGCTTCTGGAAGAGTTACTAGGCCATCATGGAGTCGACCGGCACCTCGTAGTTTTTCTGGTCGTGGGGTAAGGGGCATTAGTAGTCGCGTCCCACCAGCCAGGCCTGTTAGTGTGAGGGATAGACGTCCAGCCATGCCAATAACCGTAAGAGCTAGGCCAATGGCTCCTCTGCCTAGATCCTATGATAGGAGACCAGCTGTTCCTGCATATCCAAAAGGTAGCATGAAGAGAGATTATGGTCGGTGTGAGGATTTGCCACCACCAAGAAGTAGAGTAACTGCAGATTACAGCTCTAGGGTGCCCTCTGAGCGACGCCCATCTTGTAGGGATTATCCTGCCCGGGGCCCTACTTACTCTGAGCTTCCAAGAAGTACTACATCCCGTGTTGCACCTAGGAGGGGTTATGTGGATGATGGCTATGGCCAAAGATTTGAGAGGCCTCCACCTCTTCCACCTCCTCATCCAAGCTACCGTGAAGGGCGCTCTCGTGATTATGAAACCATCTCTGGCTCTAAACGCCAATATGCTGCCATAGATGATGTTCCTCCACGATATGCGGACAGTGGTGCTCGCCAATCAAGAGCTCGGTTGGACTATGACTATGGTGGTAGTGCTTCACAGTATGGAGATGCTTATGGTGATAGACTTGGGAGATCTAGTATGGGCTATGGTGGCAGTAGGAGTTCTATGTCAAATCAGGACTCACATGGGATGTATAGCAGTCGGCAGGGCATGAGTTACAGTGGAGGTGGTTCTTTCGGCAGTGGTGATGTTGGTGGCATGTACTCCAGTTATGGTGGTGATTATATGTCTCGTGGAAATGATGTGTTGGTGGTGGTTCATACTCATCACTTTATTCTGGCAGAGGTGTGGGTGGTAGTAGCAGTTACATGGGTGGTAGTGGGTCTGGGTCTTATTATTAAGGGTGCTCTCCTGAAGTTCTTTTGCTGGGTCAAGCCAGTTTTTGGTCATTCTTTTGTTTTCTTACGTAATGTGGAAGAAGCTGAACGACACAAGGAAAGAGAGAAATTGGAGCAGGAGAGTCCAAAGTCTAAATTCTCAGAACTTGATATAGCTGCACAGCTCATCATGTTCCTCTTGATTGAAATTCTGATGTGCAATGTTATCTGTGATAAGATTGCTGCTGCTAAATGTGTTTCTAAAAGTTCGACAGAGATTATGGATGATAACCAGGCGCCTGCTTGTTCACAATCAGGGTCCACTGACAGAGATTTCATGAGTGTACGGTCAAGCAGGACTGGCATTTCAGCCTCAGATGGCAATATATGGCTCCTAGGTGTCTGCTATAAAATCTCACAGCATGAGTCATCTGGGAATGTAGATACTAGCAATGGAATTGCAGCATTTTAA 2733 0.4471 MKSAFFPSVALVATQILRAVAQESGIFFYLFQWLLVVSNHEEKVKESLDEYEKDERLDLEDNDPEYEPEEYGGVDYDERTIEHDDVQEYGGVDYDERAIEHDDVQEVGDEIEEESEENIGEEEGDIVEEEVEDVHGDLEGEENDEHTGGEHEHAEMTDVEEDEHHEGLKERRKRKEFEVFVGGLDKDATEDDLRKVFSAVGKVTEVRLMMNPQTEKNKGFAFLRFATVEQAKRAVTELKNPVINGKKCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGLNRGFAFLEFSSRSDAMDAFKRLQKRDFVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFIDGLPPSWNEDHVRVLLKRYGEIEKIELARNMPSAKRKDFGFVTFDTHAAAVTCAKSINNSDLGEGDSKAKVRARLSRPLQRGHGKHVGRGDFRSSHASGRVTRPSWSRPAPRSFSGRGVRGISSRVPPARPVSVRDRRPAMPITVRARPMAPLPRSYDRRPAVPAYPKGSMKRDYGRCEDLPPPRSRVTADYSSRVPSERRPSCRDYPARGPTYSELPRSTTSRVAPRRGYVDDGYGQRFERPPPLPPPHPSYREGRSRDYETISGSKRQYAAIDDVPPRYADSGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGSRSSMSNQDSHGMYSSRQGMSYSGGGSFGSGDVGGMYSSYGGDYMSRGNDVLVVVHTHHFILAEVWVVVAVTWVVVGLGLIIKGALLKFFCWVKPVFGHSFVFLRNVEEAERHKEREKLEQESPKSKFSELDIAAQLIMFLLIEILMCNVICDKIAAAKCVSKSSTEIMDDNQAPACSQSGSTDRDFMSVRSSRTGISASDGNIWLLGVCYKISQHESSGNVDTSNGIAAF 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph11g1375 910 Gene3D - 344 464 IPR012677 -
Enph11g1375 910 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 103 681 - -
Enph11g1375 910 MobiDBLite consensus disorder prediction 53 72 - -
Enph11g1375 910 Coils Coil 37 57 - -
Enph11g1375 910 CDD RRM_SF 356 421 - -
Enph11g1375 910 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 177 255 IPR000504 GO:0003723
Enph11g1375 910 Gene3D - 258 340 IPR012677 -
Enph11g1375 910 CDD RRM_SF 179 250 - -
Enph11g1375 910 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 354 436 IPR000504 GO:0003723
Enph11g1375 910 SMART rrm1_1 258 337 IPR000504 GO:0003723
Enph11g1375 910 SMART rrm1_1 178 251 IPR000504 GO:0003723
Enph11g1375 910 SMART rrm1_1 355 430 IPR000504 GO:0003723
Enph11g1375 910 MobiDBLite consensus disorder prediction 139 171 - -
Enph11g1375 910 MobiDBLite consensus disorder prediction 510 646 - -
Enph11g1375 910 FunFam Heterogeneous nuclear ribonucleoprotein Q 258 340 - -
Enph11g1375 910 MobiDBLite consensus disorder prediction 433 491 - -
Enph11g1375 910 FunFam RNA recognition water-stress protein1 344 465 - -
Enph11g1375 910 Gene3D - 100 257 IPR012677 -
Enph11g1375 910 MobiDBLite consensus disorder prediction 48 77 - -
Enph11g1375 910 CDD RRM_SF 259 337 - -
Enph11g1375 910 MobiDBLite consensus disorder prediction 140 171 - -
Enph11g1375 910 SUPERFAMILY RNA-binding domain, RBD 173 255 IPR035979 GO:0003676
Enph11g1375 910 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 257 341 IPR000504 GO:0003723
Enph11g1375 910 SUPERFAMILY RNA-binding domain, RBD 256 421 IPR035979 GO:0003676
Enph11g1375 910 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 111 257 - -
Enph11g1375 910 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 259 326 IPR000504 GO:0003723
Enph11g1375 910 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 356 420 IPR000504 GO:0003723
Enph11g1375 910 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 179 247 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph11g1375 Enph-Chr11 22994339 23004362 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph11g1375 172 404 Eukaryotic Initiation Factors Gene Family AT4G34110 22.568 2.09e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph11g1375 - - gmx:100779340 1001.12