Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph11g1275 ATGCTACTCGGACAAGCTCCTCCTGTTAACTTCATATCCAAATCGAATCGAATCGAATTGCAATTTCAAAGCCGTGCCCGTCTCTTCTTCACTCAGGCTTGTTTCTGTGACACCCCATGGACGAAAATGCTCAGCAGAAGTGTTGGAAATGCATTCCTCGTTAGAGCTAGGTATTCTCCTACGGCCAAAGACGTTCTCTCTTATGACCCTAACACCGCCAATGATGGGTTGAACTCAAATTTAGAGAATTTATCAGATATAAGCATCATAAATGAAGACTTTGAACGTGACCCAGTTATTGCAAATAGCGATTCTATTGTAAAATCTCAGGGAAGGTTATCTGGGAATTTTGGTAAATTGAAAGCCCAAAAAGTAAAGAACCTCATCCACAGAACTCTTCGCAAGAAGCAGGAAAGAAGCAGTAACAATGATAACCCAGTTGTAGAACATCCAGAATTTGGAATAGAAGATGATTTGGAGCAATCTGAAAACACTATTAGTTATGGATCAAATCCCTGCATAGTACATCAGAATGAATTTCAAAACAATGAAAAAAGAGTAGGAAGGTCAGGTATAACAGTTGCAAGACATTCTGACTCTCATTTAAAAGGATGGGATAGTGGAGGATCTCGTACTTTTAAGTCTGAATCACAAAAACTACTAAAGGAACAGAGAAAACCATTGTCTGACAGTGACTTCTTCAGTCGAAAGTCCTTTAAAGATCTAGGGTGCAGTGAATATATGATTGAATCTCTGGCAAAGCAGTTTTTTCTCCGGCCTTCACATATACAGGCTATGGCATTTGAACCAGTATTTATTGGAAAGAGTTGTATCGTAGCTGATCAAAGTGGTTCTGGGAAGACATTAGCATATCTTGCACCCATAATTCAGAAGCTTAGACAAGAAGAATTGGAAGGACATTCTAAATCCTCTTCACAAGCTCCTAGAGTGGTTATATTGGCACCAACAGCTGAGTTAGCTTCTCAGGTGTTAGCTAATTGTCGATCATTATCAAAATCTGGGGTGCCATTCAAATCTATGGTTGTAACAGGTGGATTTCGACAAAAAACTCAACTGGAGAATTTACAGCAGGGTGTTGATGTTTTAATAGCAACACCTGGCCGTTTTATGTTCCTCATCAAGGAAGGCTTCTTACAGTTAACCAATCTAAGATGTGCTGTGTTGGATGAGGTAGATATACTTTTTGGTGATGAAGATTTTGAGGTGGCACTTCAGTGCTTGATTAATTCTTCACCAGTTTCCACACAATATTTATTTGTGACAGCAACTTTACCAAGAGACATCTACAATAAACTAGTTGAAGTTTTTCCTGATTGTGAAGTGATCATGGGACCTGGTATGCACCGGATAAGCTCTAGACTTGAGGAGGTTCTAGTTGATTGCAGTGGAGCAGATGGAGAAGAAAAATCTCCCGATACAGCATTTCTTAATAAGAAAACAGCTCTTCTGCAGATTGCAGAGGGAAGTCCTGTCCCAAAAACCATTATCTTCTGCAACAGAATTGAAACGTGCAGAAAAGTTGAGAATGTACTGAAGCGTTTTGATAGGAAAGAGAGTCATATACAAGTTCTACCATTCCATGCTGCCATGACACAGGAATCACGGCTTGCTCATATGGAAAAGTTTACACGTTCTCAAACAAAGGAAGTCTCCCAGTTTTTGGTTTGCACAGACAGAGCATCACGCGGAATCGACTTTACCGGAGTGGATCATGTCATACTTTTTGACTTCCCCGAGATCCAAGTGAATACGTACGCCGTGTTGGAAGAACTGCAAGAGGTGCTGCGGGAAAGGGCAAGGCATTTATATTTGTGGTTGGCAAGCAAGTATCTCTTGCACGTAAAATCATGGATAGAAATAGGAAGGGTCACCCTCTACACGATGTGCCATCTGCTTATGAATTGA 1926 0.405 MLLGQAPPVNFISKSNRIELQFQSRARLFFTQACFCDTPWTKMLSRSVGNAFLVRARYSPTAKDVLSYDPNTANDGLNSNLENLSDISIINEDFERDPVIANSDSIVKSQGRLSGNFGKLKAQKVKNLIHRTLRKKQERSSNNDNPVVEHPEFGIEDDLEQSENTISYGSNPCIVHQNEFQNNEKRVGRSGITVARHSDSHLKGWDSGGSRTFKSESQKLLKEQRKPLSDSDFFSRKSFKDLGCSEYMIESLAKQFFLRPSHIQAMAFEPVFIGKSCIVADQSGSGKTLAYLAPIIQKLRQEELEGHSKSSSQAPRVVILAPTAELASQVLANCRSLSKSGVPFKSMVVTGGFRQKTQLENLQQGVDVLIATPGRFMFLIKEGFLQLTNLRCAVLDEVDILFGDEDFEVALQCLINSSPVSTQYLFVTATLPRDIYNKLVEVFPDCEVIMGPGMHRISSRLEEVLVDCSGADGEEKSPDTAFLNKKTALLQIAEGSPVPKTIIFCNRIETCRKVENVLKRFDRKESHIQVLPFHAAMTQESRLAHMEKFTRSQTKEVSQFLVCTDRASRGIDFTGVDHVILFDFPEIQVNTYAVLEELQEVLRERARHLYLWLASKYLLHVKSWIEIGRVTLYTMCHLLMN 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph11g1275 641 Gene3D - 205 449 IPR027417 -
Enph11g1275 641 Gene3D - 471 604 IPR027417 -
Enph11g1275 641 Pfam DEAD/DEAH box helicase 262 435 IPR011545 GO:0003676|GO:0005524
Enph11g1275 641 Pfam Helicase conserved C-terminal domain 488 586 IPR001650 -
Enph11g1275 641 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 268 449 IPR014001 -
Enph11g1275 641 CDD SF2_C_DEAD 485 585 - -
Enph11g1275 641 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 237 265 IPR014014 GO:0003724
Enph11g1275 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 585 IPR027417 -
Enph11g1275 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 444 IPR027417 -
Enph11g1275 641 CDD DEADc 248 437 - -
Enph11g1275 641 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 143 586 - -
Enph11g1275 641 SMART helicmild6 512 607 IPR001650 -
Enph11g1275 641 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 484 641 IPR001650 -
Enph11g1275 641 SMART ultradead3 256 464 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph11g1275 Enph-Chr11 20681589 20689572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph11g1275 238 585 Eukaryotic Initiation Factors Gene Family AT3G19760 27.299 2.24e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph11g1275 K13179 - qsa:O6P43_017081 658.677