Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph11g1218 ATGGCAAAGCCTGGCGGGGTGGCGGTGGAATCTGATCCAACGGTGGCAACGAAGGTGTCGGAGTTGAAGAAGGAGTTGCTCAGATTGGTGAAGTCCATCGTCGACGCTGATGATTGCAGCATTCAAACCATTGATCAAGCTAATGAAATTCTCTCCGCTCTTAAGGACCTTAAGCTTCGCAAGAGATCATCGTCATCACCATCCTCACAATCATCGCCGTTGAAGCTGCACGAAAATCCGGCTTTTCCTGAAGAATTCAAGTGTCCTCTTTCGAAAGAATTGATGAGAGATCCTGTCATTGTGTCTTCTGGACAGACATATGATAGACCCTTCATCCAAAAATGGCTTAAAGCTGGGAACAGAACTTGCCCTCAAACCCAACAAGTCCTCTCGCACAATGTCCTCACTCCAAATCACCTCATAAGGGAAATGATAGAACAATGGTGTAAGAACCATGGGGTAGAACTATCCAACAAACTAATCCGCTATAGTTACAATGAGGAAGACACAATAACAGAAGCAGATCATGATAATTTTCTTTCTCTGATTGAGAAAATGTCCTCCTCATCTCTTTCTGAGCAGAAAGAAGCTGCAAAGCAGCTTCGTTTATTGACAAAGAAGAGGCCTTCGTACAGAATTCTCTTTGGTGAGACTTCACAGGCCATTCCTGAGATTCTCAAACCAATCTCTACAAGTGACTCTTTTAACAACATTCATCCTGATCTCCAAGAAGATGTGATCACAACACTTTTGAACATCTCAATCCATGACAACAACAAGAAGCTTGTAGCAGAAACTCCCATGGTGATTCCAGTCCTTGTGAAAGCCTTACAATCAGGAACTATAGAAACTAGAAGCAATTCTGCAGCTACCCTTTTCACTTTATCTGCTCTGGACTCAAACAAGGAGCTTATAGGGAAATCTGGTGCCTTAAAGCCGTTAATTGACCTTTTAGATGAAGGGCATCTCTTAGCCATGAAAGACGTTACATCAGCAATTTTCACCTTGTGTGTGATTCATGAGAACAAGGCAAGAGCAGTAAAGGATGGTGCAGTGAGTGTTATATTGCGGAAGATCTCAAGCCGGGATCATGTTGACGAATTGCTCACGATCCTTGCGCTGCTCTCAAATCATCACAAGGCCGTTCAGGACATGGTAGATCTTGGAGCCGTTCCTAACTTGCTGAGCATCATGAGGGAGAGCAACTGCGAACGAAACAAGGAGAACTGCATAGCGACCCTTTTAGCAATATGTCAGTGTGACAGAACAAAATTGAAGGAGATAAAGGAAGAGGAGATTACCTATAAAACAATCTCTGATCTTGCATTGAATGGAACTTCAAGGGCTAAGAGGAAGGCTAATGGAATTCTTGAGAGACTGAATAGGGTTGTTAATATTACACACACTGCATAA 1413 0.431 MAKPGGVAVESDPTVATKVSELKKELLRLVKSIVDADDCSIQTIDQANEILSALKDLKLRKRSSSSPSSQSSPLKLHENPAFPEEFKCPLSKELMRDPVIVSSGQTYDRPFIQKWLKAGNRTCPQTQQVLSHNVLTPNHLIREMIEQWCKNHGVELSNKLIRYSYNEEDTITEADHDNFLSLIEKMSSSSLSEQKEAAKQLRLLTKKRPSYRILFGETSQAIPEILKPISTSDSFNNIHPDLQEDVITTLLNISIHDNNKKLVAETPMVIPVLVKALQSGTIETRSNSAATLFTLSALDSNKELIGKSGALKPLIDLLDEGHLLAMKDVTSAIFTLCVIHENKARAVKDGAVSVILRKISSRDHVDELLTILALLSNHHKAVQDMVDLGAVPNLLSIMRESNCERNKENCIATLLAICQCDRTKLKEIKEEEITYKTISDLALNGTSRAKRKANGILERLNRVVNITHTA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph11g1218 470 ProSiteProfiles U-box domain profile. 81 155 IPR003613 GO:0004842|GO:0016567
Enph11g1218 470 CDD RING-Ubox_PUB 83 135 IPR045210 -
Enph11g1218 470 FunFam RING-type E3 ubiquitin transferase 81 155 - -
Enph11g1218 470 SUPERFAMILY ARM repeat 163 460 IPR016024 -
Enph11g1218 470 Pfam U-box domain 83 152 IPR003613 GO:0004842|GO:0016567
Enph11g1218 470 SMART Ubox_2 85 148 IPR003613 GO:0004842|GO:0016567
Enph11g1218 470 SUPERFAMILY RING/U-box 81 156 - -
Enph11g1218 470 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 155 IPR013083 -
Enph11g1218 470 Gene3D - 157 464 IPR011989 -
Enph11g1218 470 PANTHER U BOX DOMAIN-CONTAINING 46 460 - -
Enph11g1218 470 SMART arm_5 256 297 IPR000225 GO:0005515
Enph11g1218 470 SMART arm_5 298 338 IPR000225 GO:0005515
Enph11g1218 470 SMART arm_5 208 255 IPR000225 GO:0005515
Enph11g1218 470 SMART arm_5 378 419 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph11g1218 Enph-Chr11 19510590 19513865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph11g1218 144 470 U-box Gene Family AT3G07360 58.182 3.33e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph11g1218 - - pcin:129287872 605.905