Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph11g1039 ATGGTATCTGATGGCGATATATCTGGTGGGAAGGCGTTTCGCTTTCCCGCTAGAGGGTTGAAGAAACACTTGAAGAGGCTCAATGCCCCAAAGCATTGGATGCTTGATAAACTGGGCGGTGCCTTTGCACCGAAGCCATCATCTGGACCCCACAAGTCAAGGGAGTGCCTGCCACTTATCCTTATCCTGCGTAATAGGTTGAAGTATGCTCTCACCTATAGAGAAGTTATTTCCATCTTGATGCAGCGCCATGTTCTGGTTGATGGAAAGGTTAGAACAGACAAGACATATCCTGTAGGTTTCATGGATGTTGTATCCATTCCCAAGACCAATGAAAACTTTCGTCTTCTTTATGACACAAAAGGCCGTTTCCGTCTCCAATCTGTTAGGGATGAAGAAGCAAAGTTCAAGCTTTGCAAGGTTCGATCTGTTCAATTTGGGCAAAAGGGTATCCCCTATCTTAACACCTATGATGGGCGCACCATCCGCTATCCTGATCCACTAATCAGAGCAAATGACACCATCAAACTTGACTTGGAAACTAACAAGATCGCTGAGTTCATTAAATTTGATGTGGGGAACGTTGTCATGGTGACTGGTGGAAGAAACAGAGGTCGTGTTGGTGTTATCAAGAACAGGGAGAAGCATAAGGGAAGTTTTGAGACTATCCATGTCCAGGATGCAACTGGTCATGAGTTTGCTACTCGCATGGGTAATGTCTTCACAATTGGCAAAGGTACAAAACCTTGGGTATCTCTTCCCAAAGGTCGTGGCATCAAGTTATCTATCATCGAGGAGGCTAGGAAGAGGCTGGCTGCTCAACATGAGGCAACAGCATAA 840 0.4548 MVSDGDISGGKAFRFPARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPVGFMDVVSIPKTNENFRLLYDTKGRFRLQSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLETNKIAEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPKGRGIKLSIIEEARKRLAAQHEATA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph11g1039 279 Pfam Ribosomal family S4e 110 184 IPR013845 -
Enph11g1039 279 ProSiteProfiles S4 RNA-binding domain profile. 57 119 - -
Enph11g1039 279 SMART s4_6 57 121 IPR002942 GO:0003723
Enph11g1039 279 SMART kow_9 189 216 IPR005824 -
Enph11g1039 279 PANTHER 30S/40S RIBOSOMAL PROTEIN S4 18 269 IPR000876 GO:0003735|GO:0005840|GO:0006412
Enph11g1039 279 Pfam RS4NT (NUC023) domain 18 54 IPR013843 -
Enph11g1039 279 Pfam S4 domain 62 105 IPR002942 GO:0003723
Enph11g1039 279 FunFam 40S ribosomal protein S4 190 260 - -
Enph11g1039 279 ProSitePatterns Ribosomal protein S4e signature. 23 37 IPR018199 -
Enph11g1039 279 Pfam KOW motif 192 225 IPR005824 -
Enph11g1039 279 PIRSF RPS4a_RPS4e 16 256 IPR000876 GO:0003735|GO:0005840|GO:0006412
Enph11g1039 279 CDD KOW_RPS4 190 244 IPR041982 -
Enph11g1039 279 Gene3D - 137 187 IPR038237 -
Enph11g1039 279 Gene3D - 190 260 IPR014722 -
Enph11g1039 279 SUPERFAMILY Alpha-L RNA-binding motif 66 140 - -
Enph11g1039 279 Hamap 30S ribosomal protein S4e [rps4e]. 22 253 IPR000876 GO:0003735|GO:0005840|GO:0006412
Enph11g1039 279 Gene3D - 17 132 IPR036986 GO:0003723
Enph11g1039 279 FunFam 40S ribosomal protein S4 16 132 - -
Enph11g1039 279 Pfam 40S ribosomal protein S4 C-terminus 227 274 IPR032277 -
Enph11g1039 279 CDD S4 66 126 - -
Enph11g1039 279 FunFam 40S ribosomal protein S4 137 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph11g1039 Enph-Chr11 17538411 17540930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph11g1039 17 277 Cytoplasmic Ribosomal Protein Gene Family AT5G58420 91.571 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph11g1039 K02987 - aew:130760915 488.419