LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph11g0294	ATGACTTCAAAGGGACCTAAATTCCTGAGGTTTGAGGATTGGAGTTCAGAGTCATCATCTGGTATCGAACAGAAAAATTCTAGTGATGATGGATACCATGGGAGAAAACTCAGGCCGAGTTTGGTTGGAGCTTTATGGTACCTGCTTTCGGTAGAATCAGAGCTTCGATGCTGGCGACAAGTGTTGAGAAATACTACAAGTTATAATCATAATAAATATATGAGTTGTGATTCCTCTAATACAACTGTTGCTTCACTCCTCAATAGTTCTTATTGCGCTGTTGTTGATCCTTCTGGCAATAGCAACCCAACAAATTTCAATTTTGGAATATATACCATTGCTCTACAATCTGGTGTGGTTGAATCACAGACAGATTTTCTTCATAAGTTCTTCTACTGCTTTTGGTGGGGATTGCGCAATTTAAGTTCTTTGGGACAGAACCTTGCTACAAGTACTTATGTCTGGGAGATAATCTTTGCTATCTTCATTGCCATCTTTGGATTGGTTCTGTTCTCGTTGCTTATTGGAAACATGCAGAAATATCTGCAATCTTCAACTGTTAGAGTTGAAGAGATGAGGGTCAAAAGGAGAGATGCGGAGCAATGGATGTCCCACCGTATGCTTCCTGAGAACTTAAGGGAAAGAATCAGACGGTATGAACATTACAAATGGCAAGAAAATCGGGGTGTTGAAGAGGAAACATTAATTCGCAACCTTCCTAAAGATCTCAGAAGGGACATAAAGCGTCATCTTTGTTTGGGTTTACTTAAAAAGGTGCCAGTGTTTGAGAAAATGGATGAACAGTTGTTGGATGCAATGTGTGATCGATTGAAGCCAATTCTTTATACAGAGAAGAGCTACATTGTTCGTGAAGGAGATCCAGTTGAGGAAATGCTCTTCATTATGCGTGGAAAGCTTGCTACTACGACGACAAATGGAGGAAGAACTGGCTTCTTTAACTCCTCAGAGCTCCAAGCTGGTGATTTTTGTGGAGAAGAGCTTCTAACGTGGGCCTTGGACCCCAATTCCTCTTCAAATCTTCCTGTTTCAACTAGAACAGTGGAAACTATATCAGAAGTTGAAGCTTTTGCTTTCATGCCTGATGACCTGAAGTTTTATTCCCTGCAATGGAGGACATGGGGTGCCTGTTTCATACAAGCAGCTTGGCGTCGCTACAGCAGGAAGAAGCTAGAGAGATCGCTACATGAAGCAGAAGAAAGACTACAAGATGCTTTGGTGAATGAGAATGGATCATCAGTAACACCGAGTCTTGGTGCCACCATTTATGCATCAAGGTTTGCTGCAAATGCTTTACGAAACTTGCGACGAAACAGTGACCATAACAGTAGAATGACACAGAGATTGCTGCCTCTGCTGCCTCAGAAGCCATCTGAGCCTGATTTTACTTCTCAAAATCACTAG	1422	0.417	MTSKGPKFLRFEDWSSESSSGIEQKNSSDDGYHGRKLRPSLVGALWYLLSVESELRCWRQVLRNTTSYNHNKYMSCDSSNTTVASLLNSSYCAVVDPSGNSNPTNFNFGIYTIALQSGVVESQTDFLHKFFYCFWWGLRNLSSLGQNLATSTYVWEIIFAIFIAIFGLVLFSLLIGNMQKYLQSSTVRVEEMRVKRRDAEQWMSHRMLPENLRERIRRYEHYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLGLLKKVPVFEKMDEQLLDAMCDRLKPILYTEKSYIVREGDPVEEMLFIMRGKLATTTTNGGRTGFFNSSELQAGDFCGEELLTWALDPNSSSNLPVSTRTVETISEVEAFAFMPDDLKFYSLQWRTWGACFIQAAWRRYSRKKLERSLHEAEERLQDALVNENGSSVTPSLGATIYASRFAANALRNLRRNSDHNSRMTQRLLPLLPQKPSEPDFTSQNH	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph11g0294	473	MobiDBLite	consensus disorder prediction	444	473	-	-
	Enph11g0294	473	Gene3D	Helix hairpin bin	188	252	-	-
	Enph11g0294	473	MobiDBLite	consensus disorder prediction	13	27	-	-
	Enph11g0294	473	SUPERFAMILY	Voltage-gated potassium channels	123	183	-	-
	Enph11g0294	473	FunFam	Cyclic nucleotide-gated ion channel 1	259	377	-	-
	Enph11g0294	473	ProSiteProfiles	cAMP/cGMP binding motif profile.	261	345	IPR000595	-
	Enph11g0294	473	MobiDBLite	consensus disorder prediction	1	32	-	-
	Enph11g0294	473	Gene3D	Jelly Rolls	259	378	IPR014710	-
	Enph11g0294	473	FunFam	Cyclic nucleotide-gated ion channel 1	188	252	-	-
	Enph11g0294	473	SUPERFAMILY	cAMP-binding domain-like	190	389	IPR018490	-
	Enph11g0294	473	Coils	Coil	394	414	-	-
	Enph11g0294	473	CDD	CAP_ED	261	365	IPR000595	-
	Enph11g0294	473	SMART	cnmp_10	261	384	IPR000595	-
	Enph11g0294	473	Pfam	Cyclic nucleotide-binding domain	282	365	IPR000595	-
	Enph11g0294	473	Pfam	Ion transport protein	41	189	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Enph11g0294	473	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	41	468	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph11g0294	Enph-Chr11	9979709	9985600	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph11g0294	37	472	Ion Channels	AT5G53130	66.667	0.0	590

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph11g0294	K05391		-	gmx:100797784	655.595