LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph11g0291	ATGCCAACGAAACTCTTATCACAACTTCGTCTTATTAAAGTTTCTTCCGTCGCTTGTTTCCCTTCCATGAAGCTCGGAGCTTACATTCCAACGTCCCGGGCGGTCCCCATTTTCTCTCGTATTTTCCCCTTCAGGCTCAAGTACATGGGATTGGAGTCTCGAGCCCTACGGAACGAACTAGTCTGTGTACGGCGATTCTCTACTCGGTCATTTCCTGGGAGGACGGGGTCGAGGTCCGAGTTCAACAGGGAGAATCGGGATAGAGAGAGGGTCAGGGTTTCGAAGAGCTTGATTGAGGATGAGGCTGAACTCAGTGACTGGGTTGATGATTTGAAGACCGATTCTTATCGGGGCCGACTCACCAGCGAAGAGGATGGCTCGGATAGGGAGATGGCTCGCAATGGAGGGAGGAGAAGAGGACCTGTGTCGATGAAAGGGAGCAGGGATACTGGTTTGGATAGATTTCATGAATCAACTCGGAGGAGAACTCGGGATACATTTGAGTCATTTTCGGGGAATTCTCGTCTGAATCGGAGAGTTGAAGATGATGACGATGAGGAGAGAAATGAATTCAGCTCTCGGAGTAGCCGTAGAGTGTCCGAAGGTCGGAATGTGAAGTCTCTCTTGGGGAAGAGAGGTAGTGAGGAGTTGAGAAGAGGGAGAAAGGAAGGAAGGAGAAAATCGTATTCGGCGAGCCAGGATGATTCTGATGAAGACGAACAGGAGGCAAAAAAGTTCATGGGACGCTTTGGAGATCTTATCAGTGAAGATAGTGACGCTGAAAATACCGGGGAAGACGACGACGACGATATACTGAAGAAGAGTTTAAACTCTCAGCTGGGTCAAGAAAAGGAGTTGAAGAAGAGCAGTTTCCCAAGAGATTCTTCTGAGAGATCTGACTCTTATTTAAGTGAGACGAGATTTGATCAATGTTCAATCTCACCATTATCATTGAAAGGAGTCAAGGCTGCTGGATATGAGAAAATGACCATTGTGCAGGAGGCAACTCTTCCAGTAATTCTCAAAGGTAAGGATGTCCTAGCCAAGGCTAAAACAGGAACTGGAAAAACTGTTGCCTTTTTGCTTCCATCAATTGAAGTTGTTGCAAAGTCATCTCCAATTGATCGTGATCAAAAGCGACCTCCTATCCTTGTGCTTGTCATATGCCCAACTAGAGAGCTTGCAAGTCAAGCTGCTGCAGAAGCCACTAAACTACTGAAGTTCCACCCTTCCATTGGTGTTCAAGTTGTTATTGGAGGGACAAGACTTGCTTTGGAACAGAAACGTATGCAAGCTAACCCTTGCCAGATCCTTGTTGCTACTCCTGGAAGGCTTAGAGATCATATTGAGAACACAGCAGGTTTTGCAACTCGGCTGATGGGTGTGAAAGTTCTTGTCCTTGATGAAGCTGATCATCTACTAGACATGGGATTTCGCAAAGATATTGAGAGGATAATTGCTGCAGTTCCTAAACAGAGACAAACACTTATGTTTTCAGCCACCATCCCAGAAGAGGTCCGTCAAGTCTGCCATATTGCATTGAAAAGAGATCATGAATTTGTCAATACAGTTGAAGAGGGCAGTGAGGAGACACATTCACAGGTTCAACAGATGCATTTAGTTGCACCGTTGGACAAACATTTCTCCTTACTCTATGCTCTTCTAAAGGAGCATATTGCAGATGATGTTGACTATAAGGTTCTTGTTTTCTGCACAACTGCTATGGTCACAAGACTTGTTGCTGACCTTCTTGGTGAGTTGAACTTGAATGTGAGGGAAATTCATTCAAGAAAGCCACAGAGCTATAGAACCAGGGTCTCTGAGGAGTTTCGGAAGTCGAAGGGCCTAATCCTTGTTACTTCAGATGTATCTGCTCGTGGAGTTGATTATCCAGATGTCACTATGGTTGTACAGATGGGTTTACCAGCTGATAGAGAACAGTATATACACCGACTGGGTCGAACAGGGCGAAAAGGTAAAGAAGGGCAAGGCCTATTGGTTCTGGCTCCTTGGGAAGAATTCTTTTTATCCACAACAAAGGATTTGCCAATATCAAAAGCTCCAGTTCCTTTGATTGATCCTGACACAAAGAAAAAGGTGGAAAGGGCCCTATCACATGTGGAGATGAAGAACAAAGAAGCAGCATATCAGTCCTGGCTTGGTTACTACAATTCCAATAAGAAAGTAGGGAAGGACAAGTATAGGCTAGTCGAGCTTGCAAATGAGTTCAGTAGAAGCATGGGACTTGATAACCCTCCAGCTATTCCTAAGCTAGTCCTTGGCAAGATGGGCCTCAAAAATATACCCGGCTTACGTTCCAAATAG	2325	0.4525	MPTKLLSQLRLIKVSSVACFPSMKLGAYIPTSRAVPIFSRIFPFRLKYMGLESRALRNELVCVRRFSTRSFPGRTGSRSEFNRENRDRERVRVSKSLIEDEAELSDWVDDLKTDSYRGRLTSEEDGSDREMARNGGRRRGPVSMKGSRDTGLDRFHESTRRRTRDTFESFSGNSRLNRRVEDDDDEERNEFSSRSSRRVSEGRNVKSLLGKRGSEELRRGRKEGRRKSYSASQDDSDEDEQEAKKFMGRFGDLISEDSDAENTGEDDDDDILKKSLNSQLGQEKELKKSSFPRDSSERSDSYLSETRFDQCSISPLSLKGVKAAGYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVAKSSPIDRDQKRPPILVLVICPTRELASQAAAEATKLLKFHPSIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLMFSATIPEEVRQVCHIALKRDHEFVNTVEEGSEETHSQVQQMHLVAPLDKHFSLLYALLKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSEEFRKSKGLILVTSDVSARGVDYPDVTMVVQMGLPADREQYIHRLGRTGRKGKEGQGLLVLAPWEEFFLSTTKDLPISKAPVPLIDPDTKKKVERALSHVEMKNKEAAYQSWLGYYNSNKKVGKDKYRLVELANEFSRSMGLDNPPAIPKLVLGKMGLKNIPGLRSK	774

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph11g0291	774	MobiDBLite	consensus disorder prediction	175	256	-	-
	Enph11g0291	774	MobiDBLite	consensus disorder prediction	118	304	-	-
	Enph11g0291	774	MobiDBLite	consensus disorder prediction	149	168	-	-
	Enph11g0291	774	CDD	DEADc_MSS116	313	522	-	-
	Enph11g0291	774	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	383	673	IPR027417	-
	Enph11g0291	774	Pfam	Helicase conserved C-terminal domain	550	659	IPR001650	-
	Enph11g0291	774	ProSiteProfiles	DEAD-box RNA helicase Q motif profile.	306	334	IPR014014	GO:0003724
	Enph11g0291	774	Gene3D	-	265	521	IPR027417	-
	Enph11g0291	774	ProSiteProfiles	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.	337	520	IPR014001	-
	Enph11g0291	774	ProSiteProfiles	Superfamilies 1 and 2 helicase C-terminal domain profile.	554	705	IPR001650	-
	Enph11g0291	774	Gene3D	-	529	753	IPR027417	-
	Enph11g0291	774	SMART	helicmild6	578	659	IPR001650	-
	Enph11g0291	774	SMART	ultradead3	325	538	IPR014001	-
	Enph11g0291	774	PANTHER	RNA HELICASE	263	704	-	-
	Enph11g0291	774	CDD	SF2_C_DEAD	536	662	-	-
	Enph11g0291	774	MobiDBLite	consensus disorder prediction	286	304	-	-
	Enph11g0291	774	Pfam	DEAD/DEAH box helicase	332	508	IPR011545	GO:0003676\|GO:0005524
	Enph11g0291	774	MobiDBLite	consensus disorder prediction	118	136	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph11g0291	Enph-Chr11	9945295	9951329	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph11g0291	297	687	Eukaryotic Initiation Factors Gene Family	AT3G19760	27.518	3.55e-46	168

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph11g0291	-		-	qsa:O6P43_027365	1046.19