Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph11g0143 ATGGCATTTACAGGAACATTGGATAAATGCAATGCCTGTGATAAGACTGTGTATGTGGTGGATTTGTTGTCTCTTGAAGGAGCTCCTTACCATAAATCTTGCTTTAAATGCAGTCACTGCAAGGGCTTCCTTTCGGTATTATTCTTTCTTTTGAATATTAGGCAGATGAGTAGCTACTCCTCAATGGATGGTGTTCTCTATTGCAAACCACATTTTGAACAGCTTTTCAAGGAATCTGGCAATTTCAGCAAAAACTTCCACACAGCAAAATCTGCTGAAAAGTCACATGACACGGTGACATTGGAAGGAGAATGCTACCACAAGACATGCTTTAGGTGTGCTCATGCAGGGTGTCCTCTAACACACTCTTCCTATGCTGCTCTTGATGGAGTCCTCTATTGTAGGCACCATTTTGCTCAGCTTTTCATGGAGAAAGGTGATTACAACCATGTCAAGCAAGCCACTGCTCACAAGAAGAACTCTGCTTCTCTTGATCATCATGATCACCCTGAAGATGACTCGCACCCGGAAGAACATCTTTCTAAGGACCACACAAAACACGAAGAAGAAGAAAAAGAAGAAGAAGAATGA 591 0.4196 MAFTGTLDKCNACDKTVYVVDLLSLEGAPYHKSCFKCSHCKGFLSVLFFLLNIRQMSSYSSMDGVLYCKPHFEQLFKESGNFSKNFHTAKSAEKSHDTVTLEGECYHKTCFRCAHAGCPLTHSSYAALDGVLYCRHHFAQLFMEKGDYNHVKQATAHKKNSASLDHHDHPEDDSHPEEHLSKDHTKHEEEEKEEEE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph11g0143 196 ProSiteProfiles LIM domain profile. 83 144 IPR001781 -
Enph11g0143 196 PANTHER OS06G0237300 PROTEIN 97 189 - -
Enph11g0143 196 Gene3D Cysteine Rich Protein 89 150 - -
Enph11g0143 196 MobiDBLite consensus disorder prediction 154 189 - -
Enph11g0143 196 FunFam LIM domain and actin-binding 1 4 84 - -
Enph11g0143 196 SMART lim_4 9 71 IPR001781 -
Enph11g0143 196 SMART lim_4 83 137 IPR001781 -
Enph11g0143 196 MobiDBLite consensus disorder prediction 154 196 - -
Enph11g0143 196 ProSiteProfiles LIM domain profile. 8 78 IPR001781 -
Enph11g0143 196 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Enph11g0143 196 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 2 35 - -
Enph11g0143 196 Pfam LIM domain 98 141 IPR001781 -
Enph11g0143 196 Pfam LIM domain 10 75 IPR001781 -
Enph11g0143 196 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 112 151 - -
Enph11g0143 196 Gene3D Cysteine Rich Protein 5 82 - -
Enph11g0143 196 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph11g0143 Enph-Chr11 7512816 7516786 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Enph11g0143 LIM 4.6e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph11g0143 - - qsu:112007714 265.388