Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph11g0085 | ATGGTGCGAGGGAAGACTCAGATGAGGCGTATAGAGAACGCCACGAGCAGGCAAGTGACCTTCTCAAAGCGCCGTAATGGTTTGCTGAAGAAGGCCTTTGAACTCTCAGTTCTTTGTGATGCTGAGGTTGCTCTCATCATCTTCTCTCCTAGAGGCAAGCTTTACGAATTTTCTAGCACCAGCTTGCACGAGACAATTGAACGCTACCGCAAGCATACCAGGGATACCCAAACAGCCAACAGATCTTGTGAACAAAATACGCAGCATTTGAAGCAAGAAGCAGCAAGCATGATGAAGAAAATTGAGCTTCTTGAAGTTTCGAAACGGAAACTCTTAGGAGAAAGCTTAGGGTCATGCTCTGTAGATGAGTTGAACCAGATTGAACAACAGCTTGAGAAGAGTGTAAGCAGCATTCGAGCAAGAAAGAATCAGGTTTTCAAGGAACAAATCGACCAACTAAAAGCAAAGGGAAAAGCCCTAGAAGCTGAAAATGCAAGGCTCTCTGACAAGTGTGGTGTCCGGGCAAAAGAAGCAACAAATGGAGAGCAGCAGAGAGAGAGTCAACCCTATGAAGAAAGCAGTCCAAGTTCAGAGGTGGAAACTGAGTTGTTCATTGGATTACCAGAAACAAGAGCAAGACGAAGCATTCTCCCTCCTCTACCTCCAAGGTCTAATTGA | 678 | 0.4543 | MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSTSLHETIERYRKHTRDTQTANRSCEQNTQHLKQEAASMMKKIELLEVSKRKLLGESLGSCSVDELNQIEQQLEKSVSSIRARKNQVFKEQIDQLKAKGKALEAENARLSDKCGVRAKEATNGEQQRESQPYEESSPSSEVETELFIGLPETRARRSILPPLPPRSN | 225 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph11g0085 | 225 | Pfam | K-box region | 84 | 171 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
| Enph11g0085 | 225 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 3 | 182 | - | - | |
| Enph11g0085 | 225 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | Coils | Coil | 121 | 141 | - | - | |
| Enph11g0085 | 225 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | CDD | MADS_MEF2_like | 3 | 78 | IPR033896 | GO:0000977|GO:0045944 | |
| Enph11g0085 | 225 | Gene3D | - | 14 | 96 | IPR036879 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | Coils | Coil | 143 | 170 | - | - | |
| Enph11g0085 | 225 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | SUPERFAMILY | SRF-like | 3 | 78 | IPR036879 | GO:0003677|GO:0046983 | |
| Enph11g0085 | 225 | MobiDBLite | consensus disorder prediction | 173 | 225 | - | - | |
| Enph11g0085 | 225 | ProSiteProfiles | K-box domain profile. | 87 | 177 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
| Enph11g0085 | 225 | MobiDBLite | consensus disorder prediction | 182 | 200 | - | - | |
| Enph11g0085 | 225 | FunFam | MADS-box protein SOC1 | 14 | 95 | - | - | |
| Enph11g0085 | 225 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Enph11g0085 | Enph-Chr11 | 5581624 | 5598041 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Enph11g0085 | 1 | 158 | MADS-box Gene Family | AT2G45660 | 75.316 | 7.22e-84 | 244 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MADS-MIKC | Enph11g0085 | K-box | 8e-28 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph11g0085 | - | - | cave:132186361 | 307.375 |