Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph10g1234 ATGAACTATCAGCAGAGGCTCCAAGTTGCGGCGAAAATTATACGGGAACATGACGCACGCGCCAATGACGCGCGGCTTAACCTCGACGAGCTTGGGATTAAGGCCACCCTTAAACCCCACCAGGTGGACGGAGTTTCGTGGCTCATACGAAGATATAAACTTGGCGTCAACGTTCTCCTAGGGGATGAGATGGGACTGGGCAAGACATTGCAAGCTATCTCTTTATTAAGCTATTTAAAAGAGTGCCAATTGTCGGTTGGACCATTTTTGGTTTTATGTCCTCTAAGTGTAACAGATGGTTGGCTTTCAGAGATGGTTAAATTTGCCCCCAAACTAGAAGTAATCAAATATATTGGAGGGAAAGAATGCAGGTGCAACCTACGCAGGAATATTTATGAACATGTAAAGGAACAGTCAACAGCAGTCAATGTCTGGTTACCTTTTGATGTGCTTTTAACAACTTACGATATCGCACTGATGGATCAGGATTTTCTTTCTCAAATACCATGGCAGTATGCAATTATTGATGAAGCTCAAAGACTCAAAAACCCTTCAAGTGTTTTATATAATGTTCTCAAAGAGCGCTATGTCTTGCCAAGACGATTATTGATGACTGGGACACCTATTCAGAACAACCTTTCTGAACTTTGGGCATTGATGCATTTCTGTATGCCTTCTGTATTTGGTACATTAGAACAGTTCCTTTCTACATTCAAGGACATCAATGATCATACATCAGTGAAGGTAAAGGAGCAACTTAAAATACTGAGAAGTATATTGGCAGCTTTTATGCTTCGACGAACCAAGTCAAAGCTTATAGAGAGTCGAACTCTTGTGCTACCACCTCTCACCGAGATAACTGTTATGGCATCCCTAGTCGGCCTGCAGAAGAAGGTCTACATGTCAATTTTGAGGAAGGAGCTTCCTAAGTTACTTGCCCTGTCTTCTGGAACATCAAATCATCAGTCCCTGCAGAATATTGTTTACACATTTGTAAATACTGAATTTTTAACAGCCTGTTTTCCTGCTTTAGAGATTGATTGCAAGTATTTGCATTTGCGAACTATAGTTAAACTGCAAATTCTTTGTGCATGGGTGATACAACTAAGGAAGGCATGTAGCCATCCATATCTTTTTCCAGGTATTGAGCCTGAGCCATATGAAGAGGGAGAACATCTGGACTTTCTGGAGTTACGAAAATATTCATATGAGCGTCTTGATGGCTCAATTAGGGCTGAGGAGCGCTTTGCTGCAATAAGAAGTTTCAGTGGCACATCAGTTATATTCTATGAGCAAGATTGGAATCCTCAAGTAGACAAGCAGGCGTTGCAGCGAGCCCATCGGATTGGCCAAATGAACCATGTGTTGTGCATAAACCTTGTTACAGAAAGAACAGTAGAGGAGGTAATAATGCGGAGGGCTGAAAAGAAACTGCAGCTTAGCCTCAATGTTATAGGTGATAATATTCAGGAACATGAAGATGAACAAAAATCTGGAGTTGGAACTAGCGATTTAAAATCTATCATATTTAGCTTACATTTGTTTGATCCCAGTGAAATTAATGATGGAGGGTTTGGGGAAATGGATTTGTCAGAAATTAATGCTATGGTTGACAAGGTGACTGCAATGCGAGACACTTATGTATCTGACAAGGAAGACAGGAAATTTGAGATCAACCCTAGAAATCTTTTAGAATCATATGATGCTAATATAGGAGCTTCTGCTTCTTTTTCCTATGATCCTAATCTTGACGAGGCTTCATATCGTTCCTGGGTTAACAAATTTGAGGAAGTGTCAAAATCAAGTGGTGACTCAGTCATGGAGTTGAAGAGCAGAAGAATCTTGGATGAGGAGAAGTGCCTAAAACTTGAGGCTGCAAAGAAGAAGGCTGAGGAAAAGAAGCTATCTAAGTGGGAAGCTCTTGGATACCATTCATTGAATGTGAATGACCCCATCATCCCTCCAGATGGTGGTGTTACATCAGATTCTGGATCTGTTCATTTTGTATATGGAGATTGTACAGATCCATTGAATGTGTGTCCATCTGAACCTGGCGATAATATTCAGCTTAATAGTAGATTTTACAGCTGTGTTGATACCTCTGGAAACTGGGGCCATGGAGGAATGTTTGATGCACTGACCAAGCTTTCTTTGAGCATTAGTGATGCATATGAACAGGCTTCTGCACATGGGGACTTGCATCTCGGTGATCTGCATCTTATAAAGCTTGAAGATGACCGTGATGAACAAAATTTGAATAGAAGTACTCCCATTTGGGTTGCTTTAGCTGTAGTTCAGTCTTATAATCCAAGGCGTTAA 2319 0.4092 MNYQQRLQVAAKIIREHDARANDARLNLDELGIKATLKPHQVDGVSWLIRRYKLGVNVLLGDEMGLGKTLQAISLLSYLKECQLSVGPFLVLCPLSVTDGWLSEMVKFAPKLEVIKYIGGKECRCNLRRNIYEHVKEQSTAVNVWLPFDVLLTTYDIALMDQDFLSQIPWQYAIIDEAQRLKNPSSVLYNVLKERYVLPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLEQFLSTFKDINDHTSVKVKEQLKILRSILAAFMLRRTKSKLIESRTLVLPPLTEITVMASLVGLQKKVYMSILRKELPKLLALSSGTSNHQSLQNIVYTFVNTEFLTACFPALEIDCKYLHLRTIVKLQILCAWVIQLRKACSHPYLFPGIEPEPYEEGEHLDFLELRKYSYERLDGSIRAEERFAAIRSFSGTSVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTERTVEEVIMRRAEKKLQLSLNVIGDNIQEHEDEQKSGVGTSDLKSIIFSLHLFDPSEINDGGFGEMDLSEINAMVDKVTAMRDTYVSDKEDRKFEINPRNLLESYDANIGASASFSYDPNLDEASYRSWVNKFEEVSKSSGDSVMELKSRRILDEEKCLKLEAAKKKAEEKKLSKWEALGYHSLNVNDPIIPPDGGVTSDSGSVHFVYGDCTDPLNVCPSEPGDNIQLNSRFYSCVDTSGNWGHGGMFDALTKLSLSISDAYEQASAHGDLHLGDLHLIKLEDDRDEQNLNRSTPIWVALAVVQSYNPRR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph10g1234 772 Pfam SNF2-related domain 55 327 IPR000330 GO:0005524|GO:0140658
Enph10g1234 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 497 IPR027417 -
Enph10g1234 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 267 IPR027417 -
Enph10g1234 772 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 49 226 IPR014001 -
Enph10g1234 772 Gene3D - 9 280 IPR038718 -
Enph10g1234 772 Gene3D - 423 547 IPR027417 -
Enph10g1234 772 SUPERFAMILY Macro domain-like 666 768 IPR043472 -
Enph10g1234 772 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE 610 769 IPR031053 GO:0003678|GO:0006281|GO:0006338
Enph10g1234 772 SMART ultradead3 33 234 IPR014001 -
Enph10g1234 772 CDD SF2_C_SNF 394 461 - -
Enph10g1234 772 Gene3D Leucine Aminopeptidase, subunit E, domain 1 662 772 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph10g1234 Enph-Chr10 17607149 17632133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph10g1234 393 511 RAD5 or RAD16-like Gene Family AT1G11100 27.891 1.96e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph10g1234 SNF2_N 1.7e-48 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph10g1234 K20092 - gmx:100797182 962.6