Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph10g1074 ATGGCATTTGTTAAGGCGCAAAAAACAAAGGCCTACTTCAAGAGGTACCAAGTGAAGTTTAAGAGAAGAAGAGAGGGAAAAACCGATTACCGAGCTAGGATTCGGTTGATTAATCAGGACAAGAATAAGTACAACACCCCCAAATATCGCTTTGTGACAAACAAAGATATTATTGCACAAATAACATCCGCTAGTATTGCTGGTGATATTGTTCTTGCTGCTGCATATGCACATGAGTTGCCACGCTATGGTCTTGAAGTAGGTCTTACAAACTATGCTGCAGCTTATTGCACTGGTCTTCTTTTGGCACGTCGAGTCCTTAAAATGCTTGAAATGGAGGAGGAGTATGAGGGCAATGTAGAGGGAGCATTGGATGGGGGTCTGGATATTCCCCACAGTGAGAAAAGGTTTGCTGGCTTTAACAAGGATAAGAAAGAGCTTGATCCTGAGATTCATCGCAAGTATATTTTTGGTGGTCATGTTGCTGCATATATGAAGACTTTGATTGAAGATGAACCAGAGAAATATCAGTCACACTTTAGTGAATATATCAAGCGAGGAATAGAGCCTGATGGAATTGAGGAGATGTACAAAAAGGTTCATGCCGCTATCCGAGCTGACCCCACAGCAAAGAAGTCTGAGAAGCAACCACGAAAGGAACACAAGAGGTTCAACCTGAAGAGACTTACCTATGAGGAGAGGAAGGCTAAGTTGATTGCACGTTTGCAGGCTCTCAACTCTGCAGCTGATGCTGCTGAGGATGAGGATGACGAAGAGTGA 780 0.4321 MAFVKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVTNKDIIAQITSASIAGDIVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMEEEYEGNVEGALDGGLDIPHSEKRFAGFNKDKKELDPEIHRKYIFGGHVAAYMKTLIEDEPEKYQSHFSEYIKRGIEPDGIEEMYKKVHAAIRADPTAKKSEKQPRKEHKRFNLKRLTYEERKAKLIARLQALNSAADAAEDEDDEE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph10g1074 259 Hamap 50S ribosomal protein L18 [rplR]. 14 204 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Enph10g1074 259 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 14 121 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Enph10g1074 259 PANTHER RIBOSOMAL PROTEIN L5-RELATED 1 121 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Enph10g1074 259 SUPERFAMILY Translational machinery components 11 209 - -
Enph10g1074 259 Gene3D - 1 119 - -
Enph10g1074 259 Gene3D - 120 249 - -
Enph10g1074 259 Coils Coil 235 259 - -
Enph10g1074 259 CDD Ribosomal_L18_L5e 41 109 - -
Enph10g1074 259 PRINTS Ribosomal protein L5 signature 20 39 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Enph10g1074 259 PRINTS Ribosomal protein L5 signature 81 101 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Enph10g1074 259 Pfam Ribosomal L18 C-terminal region 193 246 IPR025607 -
Enph10g1074 259 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph10g1074 Enph-Chr10 13550365 13554582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph10g1074 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 68.385 8.20e-140 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph10g1074 K02932 - qsa:O6P43_033473 420.624