LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph10g1000	ATGCAATCAGTCGGGTCGGGTTTAATCCACCCGTATTATAAAGCAGCATTAGGGTTTCTTGCATTACTCACGGGGATTGTACTTCTCAGGCTGAGGAAGTCGCAGACCCTTCCTCTCAAAGCTCGGCAACATGGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAAAAGAAAGCGTGGAGGAAGAAGAGGAAGTATGAGCTCGGTCGTCAGCCAGCAAACACCAAGCTTTCAAGCAACAAGACAGTTAGAAGAATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGAGCTTTGCGATTGGATACTGGAAATTATTCCTGGGGAAGTGAAGCTATAACGCGCAAGACGCGTTTATTAGATGTGGTTTACAATGCCTCAAACAATGAACTTGTGCGAACTCAAACTCTTGTAAAGAGTGCCATTGTTCAGGTTGATGCTGCTCCATTCAAGCAATGGTACCATCAGCATTATGGGGTTGATATTGGTAGGAAGAAGAAAACAGCTACCAAGAAGGATTCTGCAGAGGATGGTGAAACTGCACCTGTTGAAGAGACCAAGAAAAGTAAAAGTGTGCTGAAAAAACTAGAGAGTCGCCAGAAGGATCGAAAGCTTGATCCCCACATTGAAGAGCAATTTAGTGGTGGTCGATTACTGGCTTGCATTTCTTCTCGCCCTGGTCAATGTGGCAGAGCCGATGGTTACATATTGGAAGGCAAGGAGTTGGAGTTTTACATGAAGAAAATTCAGAGGAAGAAGGGAAAGGGTGCCGGTGCTGCTTGA	783	0.461	MQSVGSGLIHPYYKAALGFLALLTGIVLLRLRKSQTLPLKARQHGDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAITRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYHQHYGVDIGRKKKTATKKDSAEDGETAPVEETKKSKSVLKKLESRQKDRKLDPHIEEQFSGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA	260

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph10g1000	260	Gene3D	Ribosomal protein S8e, subdomain	148	216	IPR042563	-
	Enph10g1000	260	FunFam	40S ribosomal protein S8	149	216	-	-
	Enph10g1000	260	ProSitePatterns	Ribosomal protein S8e signature.	51	70	IPR018283	GO:0003735\|GO:0005840\|GO:0006412
	Enph10g1000	260	NCBIfam	ribosomal protein eS8	47	239	IPR001047	GO:0003735\|GO:0005840\|GO:0006412
	Enph10g1000	260	FunFam	40S ribosomal protein S8	72	201	-	-
	Enph10g1000	260	FunFam	40S ribosomal protein S8	202	255	-	-
	Enph10g1000	260	MobiDBLite	consensus disorder prediction	40	65	-	-
	Enph10g1000	260	MobiDBLite	consensus disorder prediction	45	65	-	-
	Enph10g1000	260	MobiDBLite	consensus disorder prediction	166	208	-	-
	Enph10g1000	260	Pfam	Ribosomal protein S8e	46	237	IPR022309	-
	Enph10g1000	260	Gene3D	-	67	253	-	-
	Enph10g1000	260	PANTHER	40S RIBOSOMAL PROTEIN S8	46	255	IPR001047	GO:0003735\|GO:0005840\|GO:0006412
	Enph10g1000	260	CDD	Ribosomal_S8e_like	46	237	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph10g1000	Enph-Chr10	12602267	12605346	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph10g1000	46	260	Cytoplasmic Ribosomal Protein Gene Family	AT5G59240	81.860	2.43e-120	340

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph10g1000	K02995		-	pcin:129288318	390.578