Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph10g0962 ATGGTGTCAGGATCAGGGATCTGTGCGAAGAGGGTGGTGGTTGATGCACGTCACCACATGTTGGGTCGTCTGGCATCGATCGTGGCCAAGGAACTTCTCAATGGCCAGAAGGTGGTCGTGGTAAGGTGCGAGGAGATTTGCATCTCTGGCGGCCTCGTGAGGCAGAAGATGAAGTACATGAGGTTTCTTCGCAAGCGCATGAACACCAAGCCTTCCCATGGACCCATTCACTTCCGAGCTCCTAGCAAGATCTTTTGGCGCACTGTTCGTGGAATGATACCCCATAAGACAAAGCGTGGAGCAGCTGCACTTGCTCGATTGAAGGTTTATGAGGGCATACCCCCTCCATATGACAAGACGAAGAGGATGGTTGTCCCTGATGCTCTGAAGGTATTGAATAATCTCTTCTTTATGAATGTTGAACTGAATGCAATCAGAGTGTTGAGGCTTCAGAAAGGACACAAACACTGCTTGTTAGGAAAATTGTCATCAGAGGTTGGATGGAACTATTATGACATCATCAAGGAATTGGAGAAGAAGAGAAAGGAGAGGGCACAATTGGTCTATGAGAGGAAGAAGGAGCTCAACAAACTCAGGGCAAAAGCTGAAAAGATTGCAGATGAGAAGCTTGGTTCCCAACTTGAAATCCTTGCTCCCGTTAAGTACTGA 669 0.4768 MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGIPPPYDKTKRMVVPDALKVLNNLFFMNVELNAIRVLRLQKGHKHCLLGKLSSEVGWNYYDIIKELEKKRKERAQLVYERKKELNKLRAKAEKIADEKLGSQLEILAPVKY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph10g0962 222 FunFam 60S ribosomal protein L13a-4 8 137 - -
Enph10g0962 222 SUPERFAMILY Ribosomal protein L13 12 170 IPR036899 GO:0003735|GO:0005840|GO:0006412
Enph10g0962 222 Pfam Ribosomal protein L13 10 115 IPR005822 GO:0003735|GO:0005840|GO:0006412
Enph10g0962 222 PANTHER RIBOSOMAL PROTEIN L13 1 200 IPR005822 GO:0003735|GO:0005840|GO:0006412
Enph10g0962 222 ProSitePatterns Ribosomal protein L13 signature. 89 112 IPR023563 GO:0003735|GO:0005840|GO:0006412
Enph10g0962 222 Gene3D - 172 222 - -
Enph10g0962 222 FunFam 60S ribosomal protein L13a 171 222 - -
Enph10g0962 222 NCBIfam 50S ribosomal protein L13 12 169 IPR005755 GO:0003735|GO:0006412|GO:0015934
Enph10g0962 222 Gene3D Ribosomal protein L13 8 170 IPR036899 GO:0003735|GO:0005840|GO:0006412
Enph10g0962 222 CDD Ribosomal_L13 12 113 IPR005822 GO:0003735|GO:0005840|GO:0006412
Enph10g0962 222 Hamap 50S ribosomal protein L13 [rplM]. 11 130 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph10g0962 Enph-Chr10 12212434 12214417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph10g0962 1 222 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 82.883 1.50e-135 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph10g0962 K02872 - gmx:100813340 379.022