Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph10g0900 ATGGCAGAGCTTGAAGTTTATCGCCCGGAGGAGAAGGAGAAGGAGAAGGAGAAGCCCCATGACAATGAAGATATTGAGGAGCCAACCCAAAAGGACTCTGACTTCATGATCAACCCACAGAGCTTCACTCCCTCTCTCAATACCTCCCAGTGGCCGATTCTCCTCAAGAACTACGACCGCCTCAATGTACGGTCCGCACACTACACCCCAATTTCCTCCGGTTACTCCCCCCTCAAGCGTCCTCTTCCTGAGTACATCAAGTATGGCGTCCTCAATCTCGATAAACCCTCGAACCCGTCTTCGCATGAGATCGTAGCTTGGATCAAACGAATCCTCCGGGTCCAGAAAACCGGTCACAGCGGTACCCTCGATCCGAAAGTCACAGGAAACCTCATAGTTTGCATTGATAGAGCGACCCGACTCGTGAAAACGCAACAGGAAGTAGGGAAAGAGTACGTGTGTATTGCTCGATTGCATTCGATGGTTCCCGAAGTTACAAAGGTGGCTCGAGCACTTGAAACGCTTACCGGAGCTCTGTTTCAGAGGCCACCATTGATTTCTGCGGTGAAGAGGAACCTTAGGATTAGGACTGTATATGAGAGTAAGCTTCTGGAGTATGACCCAGATAAGCATTTGGTTGTGTTTTGGGTTTCATGTGAGGCAGGTACATATATTAGAACTCTGTGTGTTCACTTGGGTTTGGTTCTTGGTGTGGGAGGGCATATGCGAGAGCTTAGGAGGGTGCGATCGGGGGTTTTGGGTGAGAAAGATAATATGGTGACTATGCATGATGTGATGGATGCCCAATGGGTTTATGATAATTTGAAGAATGAAAGTTATTTGAGAAGGATTATTATGCCGCTTGAAGTACTTTTAACGAGTTACAAGAGATTGGTTGTGAAAGATTCAACTGTTAATGCGATTTGTTTTGGGGCAAAGCTGATGCTTCCTGGGCTATTGAGGTTTGAGAACGATATTGAGGTGGGTGAGCAAGTTGTGCTTATGACTACCAAGGGTGAAGCAATCGCTTTGGGAATTGCAGAGATGACTACTGCTGTAATGGCAACCTGTGATCATGGGGTGGTGGCAAGGATCAAAAGGGTTGTGATGGATCGAAACACCTATCCAAGGAAATGGGGTCTCGGCCCAAGGGCATCGATGAAGAAGAAACTGATTGCAGAAGGGAAGCTAGATAAGCATGGGAAGCCAAATGAGAATACTCCTCAAGAGTGGCTGAGGAATGTGGTTTTACCTACTGGTGGAGACAGCATCATTGCAGGTCTTGCTGCTTCACCTGCTGTCGAGGAGAAGGAAAAGATTAAGAGTGATCATGAAGTAGAGGGACGGAAGAGGAAAATAGTTGAAAGTAATGACAGTCCCGTTCCCCCTAAGAAGGTTAAAGCTCAAGATGTTGAAAAGTTTGAAGGGGAAGATCGGAAGTTACCTAGAGAGGATGCTGATCGAAGTGAGAAAAGGAAGAAACATAAAAAGAAGAAATCCAAATATGCAGAGGAGGAGTAG 1521 0.4655 MAELEVYRPEEKEKEKEKPHDNEDIEEPTQKDSDFMINPQSFTPSLNTSQWPILLKNYDRLNVRSAHYTPISSGYSPLKRPLPEYIKYGVLNLDKPSNPSSHEIVAWIKRILRVQKTGHSGTLDPKVTGNLIVCIDRATRLVKTQQEVGKEYVCIARLHSMVPEVTKVARALETLTGALFQRPPLISAVKRNLRIRTVYESKLLEYDPDKHLVVFWVSCEAGTYIRTLCVHLGLVLGVGGHMRELRRVRSGVLGEKDNMVTMHDVMDAQWVYDNLKNESYLRRIIMPLEVLLTSYKRLVVKDSTVNAICFGAKLMLPGLLRFENDIEVGEQVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRNTYPRKWGLGPRASMKKKLIAEGKLDKHGKPNENTPQEWLRNVVLPTGGDSIIAGLAASPAVEEKEKIKSDHEVEGRKRKIVESNDSPVPPKKVKAQDVEKFEGEDRKLPREDADRSEKRKKHKKKKSKYAEEE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph10g0900 506 PANTHER CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 11 502 IPR004802 GO:0006396
Enph10g0900 506 MobiDBLite consensus disorder prediction 1 37 - -
Enph10g0900 506 Pfam DKCLD (NUC011) domain 48 105 IPR012960 -
Enph10g0900 506 SUPERFAMILY Pseudouridine synthase 48 293 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Enph10g0900 506 Pfam TruB family pseudouridylate synthase (N terminal domain) 109 225 IPR002501 GO:0006396
Enph10g0900 506 Pfam PUA domain 296 368 IPR002478 GO:0003723
Enph10g0900 506 SUPERFAMILY PUA domain-like 295 376 IPR015947 -
Enph10g0900 506 Gene3D Pseudouridine synthase 81 287 - -
Enph10g0900 506 CDD PseudoU_synth_hDyskerin 87 269 - -
Enph10g0900 506 Pfam tRNA pseudouridylate synthase B C-terminal domain 226 292 IPR032819 -
Enph10g0900 506 FunFam H/ACA ribonucleoprotein complex subunit CBF5 81 287 - -
Enph10g0900 506 Gene3D PUA domain 48 379 IPR036974 GO:0003723
Enph10g0900 506 SMART pua_5 296 370 IPR002478 GO:0003723
Enph10g0900 506 MobiDBLite consensus disorder prediction 434 458 - -
Enph10g0900 506 MobiDBLite consensus disorder prediction 465 491 - -
Enph10g0900 506 MobiDBLite consensus disorder prediction 1 31 - -
Enph10g0900 506 NCBIfam uncharacterized domain 2 291 365 IPR004521 GO:0003723
Enph10g0900 506 MobiDBLite consensus disorder prediction 432 506 - -
Enph10g0900 506 ProSiteProfiles PUA domain profile. 295 370 - -
Enph10g0900 506 NCBIfam RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 55 380 IPR004802 GO:0006396
Enph10g0900 506 CDD PUA_Cbf5 294 368 - -
Enph10g0900 506 SMART DKCLD_2 47 105 IPR012960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph10g0900 Enph-Chr10 11566679 11568443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph10g0900 1 462 NAC Transcription Factor Family AT3G57150 77.682 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph10g0900 K11131 - pvy:116119583 756.133