Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph10g0528 ATGTCAGAAGGTGCAGAAGTTGATGAGCGTGTGGACTTTGACGAGGAAAACTACATGGAAGAGATGGATGATGATGTGGAGGAACAAATATATGATGATGGAGTGGATGGAGGTGGAGATGAGAATGAAGGGAATGTTGAGGAACATGAATATGAAGATTCAGTAGCAGAAACTTGTGGGAAAGACCAATATCATGAAGTGGATGTTAGTGACATTGTGACTGAATCTGTAGAACATGAGCAAAAGCCATCTTCCATTGATGAAGATGAGAAGGAGAAGCATGAAGAACTTCTTGCCCTTCCTCCTCATGGTTCTGAAGTCTTTATTGGTGGACTTCCTCGGGATACATGTGAAGATGATTTAAGAGAAATGTGTGAGCCGATTGGTGATATACTTGAGGTGAGACTTATGAAAGATAGGGACACTGGAGATGTCAAAGGTTATGCTTTTGTGGCATTTAAAACAAAAGAAGTCGCACAAAAGGCCATCGAAGAGTTGCATAACAAGGAATTTAAGGGTAAAACTCTAAGGTGTTCTGTGTCTGAAACAAAACACAGATTGTTCATTGGTAATGTTCCAAAAAACTGGACAGAGGATGAGTTTAAGATTGTCATCATGGGTGTTGGTCCTGGAGTTGAAAACATTGAGCTAATAAAGGACCCTCAAAATGCAAGCAGGAATCGTGGGTTTGCTTTTGTTTTGTATTATAATAATGCCTGTGCTGATTATTCTCGGAGAAAGATGTCAAATGCAAACTTTAAGTTGGACGGTAATACCCCCACTGTTACATGGGCTGATCCAAAGAACTCAACTGAACATTCTGCTTCCTCACAGGTTAAAGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAACAACTGAAGGAACTGTTCTGTCGCCATGGGGAAGTAACAAAGGTGGTCATGCCTCCTGGGAAAGCTGGAGGGAAACGTGACTTTGGTTTTATTCATTATGCGGAGAGGTCAAGTGCATTGAAGGCAGTAAAAGAGACAGAAAAATATGAAATAGATGGCCAGGCTTTGGAAGTTGTTCTAGCAAAGCCTCAAACCGATAAGAAGTCTGATGGAGGTTATGCCTACAATCCTGGGCTTCAACCACATCCTGGGTATGGTGGTTTTTCGGGAAATCTATATGGCTCTGTGCGGGCTGGATATGGTGTTACTGGGGGTTATCAACAGCCAGTGATATATGGTAGGGGTCCAATGCCAGCAGGAATGCAAATGGTCCCAATGGTATTACCTGATGGTCGTATTGGTTATGTCCTTCAACAGCCTGGTGCGCAGATGCCATCTCCCAGACCCCGCAGAGTTGATCGTAACAATGGCCAGAGTAGTCAGCCAGGGCGGGGGGGAGGTAGTAGCAAAGATGACAGTAATCGCAGTAGAAGGTACCGACCTTATTGA 1431 0.4319 MSEGAEVDERVDFDEENYMEEMDDDVEEQIYDDGVDGGGDENEGNVEEHEYEDSVAETCGKDQYHEVDVSDIVTESVEHEQKPSSIDEDEKEKHEELLALPPHGSEVFIGGLPRDTCEDDLREMCEPIGDILEVRLMKDRDTGDVKGYAFVAFKTKEVAQKAIEELHNKEFKGKTLRCSVSETKHRLFIGNVPKNWTEDEFKIVIMGVGPGVENIELIKDPQNASRNRGFAFVLYYNNACADYSRRKMSNANFKLDGNTPTVTWADPKNSTEHSASSQVKALYVKNIPENTTTEQLKELFCRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVLAKPQTDKKSDGGYAYNPGLQPHPGYGGFSGNLYGSVRAGYGVTGGYQQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGAQMPSPRPRRVDRNNGQSSQPGRGGGSSKDDSNRSRRYRPY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph10g0528 476 CDD RRM_SF 107 179 - -
Enph10g0528 476 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 29 470 - -
Enph10g0528 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 105 183 IPR000504 GO:0003723
Enph10g0528 476 MobiDBLite consensus disorder prediction 49 70 - -
Enph10g0528 476 MobiDBLite consensus disorder prediction 8 48 - -
Enph10g0528 476 Gene3D - 11 185 IPR012677 -
Enph10g0528 476 MobiDBLite consensus disorder prediction 432 476 - -
Enph10g0528 476 SMART rrm1_1 281 353 IPR000504 GO:0003723
Enph10g0528 476 SMART rrm1_1 186 263 IPR000504 GO:0003723
Enph10g0528 476 SMART rrm1_1 106 179 IPR000504 GO:0003723
Enph10g0528 476 SUPERFAMILY RNA-binding domain, RBD 102 269 IPR035979 GO:0003676
Enph10g0528 476 Gene3D - 186 266 IPR012677 -
Enph10g0528 476 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 8 185 - -
Enph10g0528 476 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 186 266 - -
Enph10g0528 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 107 177 IPR000504 GO:0003723
Enph10g0528 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 187 253 IPR000504 GO:0003723
Enph10g0528 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 282 350 IPR000504 GO:0003723
Enph10g0528 476 MobiDBLite consensus disorder prediction 446 463 - -
Enph10g0528 476 SUPERFAMILY RNA-binding domain, RBD 276 381 IPR035979 GO:0003676
Enph10g0528 476 MobiDBLite consensus disorder prediction 1 70 - -
Enph10g0528 476 Gene3D - 267 397 IPR012677 -
Enph10g0528 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 185 267 IPR000504 GO:0003723
Enph10g0528 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 280 357 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph10g0528 Enph-Chr10 7546002 7555795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph10g0528 107 445 Eukaryotic Initiation Factors Gene Family AT2G23350 25.789 1.93e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph10g0528 K13161 - gmx:100790907 764.222