Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph10g0460 ATGCAAAATCCCAGGCTGAAGCAGCACCAACAGCAAGCTTTGATGCAGCAAGCTCTAATGCAACAACAGTCTCTCTACCACCCTGGCCTCTTAGCTGCTCCGCAGATTGAACCAATTCCCAGTGGAAATCTGCCTCCTGGTTTTGATCCAAGTTCTTGCCGCAGTGTGTATGTGGGGAATATTCATCCACAGGTAACTGAGTCACTTCTTCAAGAACTTTTTGCAAATAATGGCCCAGTTGAGGGTTGTAAACTTATTAGAAAGGAGAAGTCATCCTATGGATTCATTCACTATTTTGATCGCAGATCTGCTGCCCTTGCCATAGTATCTCTCAATGGAAGGCACTTGTTTGGCCAGCCTATCAAAGTTAACTGGGCATATGCCAGTGGTCAGAGAGAGGATACATCAGGTCATTACAACGTATTTGTTGGTGATCTTAGTCCTGAGGTTACTGATGCTACATTGTTTGTTTGCTTTTCTGTATACCCCAGTTGTTCAGATGCAAGGGTTATGTGGGATCAGAAAACTGGACGATCAAGGGGGTTTGGATTTGTTTCATTCCGTAATCAGCAGGTAAGTGGCTTGGTAGTAGACAAATACGCTGCAACTGGGCAACAAAAGTATTTTGTTCTTTTCATTAATGTATGGGGACTGCCTAAAATTTTTTCCACTCCTGGTGCAGAGGATGGTAAGGAGATGACTAACAGCGATGCCCCAGAGAACAATCCTCAATACACTACTGTAACCCAGCTTGATCTCCATCGCCACTTCCATGCTCTTGGGGCTGGAGTGATAGAGGAGTGCTCCTGGGGGAGCAAGCCCACTCCACCTGGAACTGCTTCAAATCCTCTCCCCCCGCCTGCTGCTGCACCTCTGCCAGGCTTCTCTGCATCTGATCTTGTGGCCTATGAGCGTCAGCTAGCAATGGGCAAGATGGGTGGTATCCATGCCCTGATGCATCCCCAAGGACAGCATCCTCTTAAACAGGCAGCACTTGGAGGAAGCCAGGCGATATATGACGGTGGGTTCCAAAATGTTGCTGCTGCACAGCATATGATGTATTACCAATGA 1071 0.4725 MQNPRLKQHQQQALMQQALMQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSSCRSVYVGNIHPQVTESLLQELFANNGPVEGCKLIRKEKSSYGFIHYFDRRSAALAIVSLNGRHLFGQPIKVNWAYASGQREDTSGHYNVFVGDLSPEVTDATLFVCFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQVSGLVVDKYAATGQQKYFVLFINVWGLPKIFSTPGAEDGKEMTNSDAPENNPQYTTVTQLDLHRHFHALGAGVIEECSWGSKPTPPGTASNPLPPPAAAPLPGFSASDLVAYERQLAMGKMGGIHALMHPQGQHPLKQAALGGSQAIYDGGFQNVAAAQHMMYYQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph10g0460 356 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 54 128 IPR000504 GO:0003723
Enph10g0460 356 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 141 191 IPR000504 GO:0003723
Enph10g0460 356 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 56 122 IPR000504 GO:0003723
Enph10g0460 356 MobiDBLite consensus disorder prediction 270 289 - -
Enph10g0460 356 Gene3D - 136 203 IPR012677 -
Enph10g0460 356 Gene3D - 1 135 IPR012677 -
Enph10g0460 356 SUPERFAMILY RNA-binding domain, RBD 51 193 IPR035979 GO:0003676
Enph10g0460 356 CDD RRM1_PUB1 56 126 - -
Enph10g0460 356 FunFam oligouridylate-binding protein 1B-like isoform X2 1 136 - -
Enph10g0460 356 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 139 206 IPR000504 GO:0003723
Enph10g0460 356 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 52 191 - -
Enph10g0460 356 SMART rrm1_1 140 212 IPR000504 GO:0003723
Enph10g0460 356 SMART rrm1_1 55 124 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph10g0460 Enph-Chr10 6632989 6641398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph10g0460 55 199 Eukaryotic Initiation Factors Gene Family AT1G22760 31.081 4.68e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph10g0460 K13201 - gmx:100814415 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph10g0460 10 6632989 6641398 Enph10g0460 10 6632989 6641398 ECH