LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph10g0136	ATGATGGATGGTTGCAAAAAGTCCTCCATTTCAGGTCAGTTATACAGTTCTCTCTACGTCAATCCTCTCACTGAGCTCAGGTACAATCGTAGCTGTAGCTGCGATTATGGTCGTGTAGCCACCAAAGGTAACGACTTCGAAGATTTCACTCACCGAAGCAGGAAAATCTTGACGGATAACAAAGAGAATGAGACGCCTAACAAAAAAGAAATTGTAGTTTCTTCTGGTGATGACAAGGAAAATGCAGTGCCCAAACGGTTCACCAATTCTAGGTCTTTGTCCACTGATAGGATCTTGAAGCCTACTTCTCTTCAGTTCTGCATGCAAATGAGTGATTCTGAAAAGGCTTTTGGGTCTAAGATATGGGATCGTTTTGACTCTGAGAAATCGAGTTCTTTGAATGTTTGGGACTTTTCTGATTCTGAAGCAGCTCCAGCTTCATCCTGGTCGACTCTGCCTAACAAGTCCTTGATCTGTAGACCACTGCCTGTTGATATTGGAAGATGTACATGTGTTATTGTGAAGGAAGAATCGCCTGAAGGACTATCTGGGGGCTCACTGTTTTCACTTTATACCTATGAAGGACAGGGACGACAGAATAGGAAATTGGCCGTGGCTTACCACAAGAGGCGTAACGGAAGGTCTCAATTCACCCTAGCTCAGAATGTAAAAGGACTTTTGTCCAATTCAGATGATAGTTTTCTTGGAAGTGTAGTGGCTAACTTCATGGGTTCAAAATACCACATATTCGATCAGGGATATCGTCATGATTCCTTGGGTCAACAGCCAAAACCACCTCTTGCCATTGTAGCATATATACCTACTGTAACAACATGTACAGGAAGTCACAGAAGCATGAGGGCGTATGTACCTAGACATCAATCTATGTCACTTAAGAACATAAGTCAGGTACAGCATTTCAAAGGACTGCCAGTAGATTGGAAAGAAAAACCGGAGAAAGTTCATCAGCTATTCTCAAAGATGCCAATTTACAACAAGACTTCAAAGCAGTTTGAACTTGACTTCAGAGATAAAGGAAGACCAGGACTTCAAATCCAAACATCAGTAAAAAATTTCCAGCTGACTTTGGAGGAGAATGGGAGGCAAACAATCCTGCAGCTAGGTAAGGTGGCAAAATCAAAGTTTGTTATGGATTACAGATATCCTTTGACAGGTTACCAAGCGTTCTGCATATGTTTGGCTTCCATTGATTCAAAGCTTTGCTGCACAGTATAG	1236	0.4199	MMDGCKKSSISGQLYSSLYVNPLTELRYNRSCSCDYGRVATKGNDFEDFTHRSRKILTDNKENETPNKKEIVVSSGDDKENAVPKRFTNSRSLSTDRILKPTSLQFCMQMSDSEKAFGSKIWDRFDSEKSSSLNVWDFSDSEAAPASSWSTLPNKSLICRPLPVDIGRCTCVIVKEESPEGLSGGSLFSLYTYEGQGRQNRKLAVAYHKRRNGRSQFTLAQNVKGLLSNSDDSFLGSVVANFMGSKYHIFDQGYRHDSLGQQPKPPLAIVAYIPTVTTCTGSHRSMRAYVPRHQSMSLKNISQVQHFKGLPVDWKEKPEKVHQLFSKMPIYNKTSKQFELDFRDKGRPGLQIQTSVKNFQLTLEENGRQTILQLGKVAKSKFVMDYRYPLTGYQAFCICLASIDSKLCCTV	411

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph10g0136	411	Pfam	Tub family	160	405	IPR000007	-
	Enph10g0136	411	Gene3D	Tubby Protein; Chain A	151	410	IPR025659	-
	Enph10g0136	411	PANTHER	TUBBY-RELATED	87	408	-	-
	Enph10g0136	411	SUPERFAMILY	Tubby C-terminal domain-like	146	410	IPR025659	-
	Enph10g0136	411	PRINTS	Tubby superfamily signature	367	386	IPR000007	-
	Enph10g0136	411	PRINTS	Tubby superfamily signature	234	258	IPR000007	-
	Enph10g0136	411	PRINTS	Tubby superfamily signature	347	363	IPR000007	-
	Enph10g0136	411	PRINTS	Tubby superfamily signature	388	410	IPR000007	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph10g0136	Enph-Chr10	3027519	3031075	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph10g0136	59	304	TUB Transcription Factor Family	AT1G16070	53.846	9.52e-93	279

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TUB	Enph10g0136		Tub	1.4e-41	CL0395

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph10g0136	K19600		-	cave:132188154	563.918