LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph10g0096	ATGGCTTCAGACTCTCTCCTTGATCTTCTCTTCGAATTTCTCTTCTTCTTCTCCTTCTTCTCTTGCTTCATCGTCACCGAACTTCTCTGCGTTCAATATCCTTCTTTTTCAGCTCTGTTTCTCTCAGATGAACTTGAACTTGTCCCTTTTAAGCATGATTCTCCTTCATCATCATCATCATCATCATCTTCTTCTTCTTCTCCTTCTTCCTCCTCCTCCCTCCTTTTGTCTTCGTCGTCATCTTCATCATCATCATCATCTTCTTCTTCTTCTTCCTCCTCCCTCCTTTTGTCATCGTCGTCGTCGTCGTCGTCGTCGTCGTCTTCTTCATCATCATCATCATCATCATCATCTTCGTCGTCATTGTCTTCTTCTTCATCATCATCATCATCATCTTCGTCGTCATTGTCTTCTTCCCTCCGTTTACCATGGCTATCATCGTTATCATCCTCTTTCCCCCGATGGTCATCGTTATCATCTTCTTCGTCGAAAATGACCCCAGAAACTCAGCACGCGAATTCCTCAAATGAAACAGGTGAATCCTTGCAAGTCATCTGTGAAATCTGTGCAGAAATTAGAGGGACTACCCAGATGATCGAGAATCAAACCTGCCACCATTCTTTCTGCTCTGATTGTCTAACAAAACATGTGGCTGTAAAAATCCAAGACAGCATAACAGTAGTTTCGTGTCCTGGTTTGGGCTGCAAAGCTGTTCTTGAGCTGGAAGCTTGTCTGCCATGGCTTCCCAAGGACTTGTTTGATAGGTGGGATCGGGCTCTATGTGAAGCTCTATTTCTAGAAGTCCCCAAAATTTTCTGCCCCTTCAAGGACTGTTCAGTTATGTTGCTGCTTGAGAATGGAGGAGAAGGTGAACAAGCTGGAAGGGATACAGAGTGCCCAGTCTGCCATAGAATGTTCTGTGCAAGGTGTAATGTCCCTTGGCATCCTGGAATTGAATGTGAGGAATTCCAGAAACTGAATGAGCACGAGAGAGGGAGGGAAGATCTGCTTGTGAGACAGCTTGCTAAAGAAAAGAAATGGAGAAGGTGTCCCAAGTGTAAGTTCTATGTAGAGAAGATGAATGGGTGCGTCCATATCACCTGCAGATGCAGATATGAGTTTTGCTATATGTGTGGACAACAATGGAGTCCTGGCCACAGCGGATGCCAAATAAATGAGATGATTATTTTAATGTGA	1197	0.4411	MASDSLLDLLFEFLFFFSFFSCFIVTELLCVQYPSFSALFLSDELELVPFKHDSPSSSSSSSSSSSSPSSSSSLLLSSSSSSSSSSSSSSSSSSLLLSSSSSSSSSSSSSSSSSSSSSSSSLSSSSSSSSSSSSSLSSSLRLPWLSSLSSSFPRWSSLSSSSSKMTPETQHANSSNETGESLQVICEICAEIRGTTQMIENQTCHHSFCSDCLTKHVAVKIQDSITVVSCPGLGCKAVLELEACLPWLPKDLFDRWDRALCEALFLEVPKIFCPFKDCSVMLLLENGGEGEQAGRDTECPVCHRMFCARCNVPWHPGIECEEFQKLNEHERGREDLLVRQLAKEKKWRRCPKCKFYVEKMNGCVHITCRCRYEFCYMCGQQWSPGHSGCQINEMIILM	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph10g0096	398	FunFam	RBR-type E3 ubiquitin transferase	322	393	-	-
	Enph10g0096	398	PANTHER	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	73	382	IPR031127	GO:0004842\|GO:0016567
	Enph10g0096	398	ProSitePatterns	Zinc finger RING-type signature.	204	213	IPR017907	-
	Enph10g0096	398	ProSiteProfiles	TRIAD supradomain profile.	182	393	IPR044066	-
	Enph10g0096	398	SUPERFAMILY	RING/U-box	260	325	-	-
	Enph10g0096	398	Gene3D	-	316	394	-	-
	Enph10g0096	398	CDD	Rcat_RBR_unk	346	382	-	-
	Enph10g0096	398	SUPERFAMILY	RING/U-box	331	391	-	-
	Enph10g0096	398	SUPERFAMILY	RING/U-box	184	263	-	-
	Enph10g0096	398	ProSiteProfiles	Zinc finger RING-type profile.	186	231	IPR001841	-
	Enph10g0096	398	CDD	BRcat_RBR_unk	269	323	-	-
	Enph10g0096	398	FunFam	RBR-type E3 ubiquitin transferase	181	267	-	-
	Enph10g0096	398	Pfam	IBR domain, a half RING-finger domain	338	386	IPR002867	GO:0008270
	Enph10g0096	398	Pfam	IBR domain, a half RING-finger domain	270	320	IPR002867	GO:0008270
	Enph10g0096	398	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	179	264	IPR013083	-
	Enph10g0096	398	SMART	ibrneu5	330	389	IPR002867	GO:0008270
	Enph10g0096	398	SMART	ibrneu5	254	320	IPR002867	GO:0008270
	Enph10g0096	398	MobiDBLite	consensus disorder prediction	54	138	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph10g0096	Enph-Chr10	2534579	2537243	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph10g0096	186	379	C3H Transcription Factor Family	AT2G19610	27.094	9.94e-18	82.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph10g0096	K11975		-	qsa:O6P43_027978	342.043