LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph10g0095	ATGGCTCATGACTCTGCCTTTGATCTTCACTGCCTTGATGATTCTCTCTTGTCTGCTTTGTTTCACGAAGATGAAGATGGGCGTGATGTTCCCTTTACTGATGATAAATATGCTCAGTGCTTGCAGTTTCAGGAGACCCTCTTCTCCTCTTTGATCGCTTCTCAAAAGGCCAACGATGATTCATCTTCTTCCATCCTCCTTTTACCATCGTCTTCATCTTTATTGTCTTCTTCATCTTCATCTTCTTCCATCCTCCTTTTACCATCGTCTTCATCTTTATTGTCTTCTGCATCTTCATCATCTCCTGCTCCTCCGTTAAAATTAATCAACGCTTGCCCAACCCCAGAAATTGAGAACGTGATACCCACAGATGAAACAGACGAATCCTCGCTAGTCATCTGCGAAATCTGTGCAGAAACTAGAGGGGCTGCCCAGATGTTCAAGAATCAAATATGCCACCATTCCTTTTGCTCCGATTGTGTTACTAAACAAGTGGCCACCAAAATCCAAGACAGCATAACAGTAGTTTCGTGTCCTGGTTTGGACTGTAAAAGTGATCTTGAGCTGGATGCTTGTCGGCCATGGCTTCCCAAGGACTTGCTTGATAGGTGGGACCAAGCTCTGTGTGAAGCTCTCTTGCTTGCAGTCCCTAAATTTTACTGCCCCTTTAAGGACTGTTCAGCTATGTTGCTGCTTGAGAGTGAGGGAGATGAGCAAACTATAAGAGAGGCAGAGTGCCCTTTTTGCCATAGACTCTTCTGTGCAAGGTGTTATGTGCAATGGCATCCTGGAGTTGAATGTGAGGAATACCAGATACTGAACGAGCGTGAAAAACAAAGGGATGATCTGATTGTGAGAGAGCTTGCTAAAGAAAAGAGATGGAGGAGGTGTCCTCAGTGTAAGTTCTTTGTTGAGAAGATCGATGGGTGCTTGCATATCACTTGCAGGTGCCATTATGAGTTCTGTTATGGATGTGGGGAACAATGGACTTCTTCTCATGGAGGCTGCCAAACAAATTAG	1020	0.4451	MAHDSAFDLHCLDDSLLSALFHEDEDGRDVPFTDDKYAQCLQFQETLFSSLIASQKANDDSSSSILLLPSSSSLLSSSSSSSSILLLPSSSSLLSSASSSSPAPPLKLINACPTPEIENVIPTDETDESSLVICEICAETRGAAQMFKNQICHHSFCSDCVTKQVATKIQDSITVVSCPGLDCKSDLELDACRPWLPKDLLDRWDQALCEALLLAVPKFYCPFKDCSAMLLLESEGDEQTIREAECPFCHRLFCARCYVQWHPGVECEEYQILNEREKQRDDLIVRELAKEKRWRRCPQCKFFVEKIDGCLHITCRCHYEFCYGCGEQWTSSHGGCQTN	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph10g0095	339	FunFam	RBR-type E3 ubiquitin transferase	129	215	-	-
	Enph10g0095	339	SUPERFAMILY	RING/U-box	128	211	-	-
	Enph10g0095	339	CDD	Rcat_RBR_unk	293	329	-	-
	Enph10g0095	339	Gene3D	-	219	268	-	-
	Enph10g0095	339	ProSiteProfiles	TRIAD supradomain profile.	130	339	IPR044066	-
	Enph10g0095	339	CDD	BRcat_RBR_unk	217	270	-	-
	Enph10g0095	339	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	127	212	IPR013083	-
	Enph10g0095	339	ProSiteProfiles	Zinc finger RING-type profile.	134	179	IPR001841	-
	Enph10g0095	339	SUPERFAMILY	RING/U-box	277	337	-	-
	Enph10g0095	339	PANTHER	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	64	329	IPR031127	GO:0004842\|GO:0016567
	Enph10g0095	339	SUPERFAMILY	RING/U-box	208	271	-	-
	Enph10g0095	339	Gene3D	-	269	339	-	-
	Enph10g0095	339	ProSitePatterns	Zinc finger RING-type signature.	152	161	IPR017907	-
	Enph10g0095	339	SMART	ibrneu5	277	336	IPR002867	GO:0008270
	Enph10g0095	339	SMART	ibrneu5	202	267	IPR002867	GO:0008270
	Enph10g0095	339	FunFam	RBR-type E3 ubiquitin transferase	269	339	-	-
	Enph10g0095	339	Pfam	IBR domain, a half RING-finger domain	286	336	IPR002867	GO:0008270
	Enph10g0095	339	Pfam	IBR domain, a half RING-finger domain	218	267	IPR002867	GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph10g0095	Enph-Chr10	2528865	2532896	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph10g0095	134	326	C3H Transcription Factor Family	AT2G19610	29.000	5.28e-21	91.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph10g0095	K11975		-	qsa:O6P43_027978	392.504