Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2211 ATGTTGTCTCAGTTGGTGCAAATTCAGACTAGTTCCTTTTTCCTCCCACGTGAGAGGCACCGGGCTGAGCGTTTTCTGTTGTTGAGCAAGTGCCTCACGTTCGCATTCACACCTAAGTTTCAGTTTCAGTTTCAGTTTCAGTTTCAATTTGATTATTGTGAAACGGGGTCAAGATCGAGATTAAGACGCAGTGGTGGTTGTAGCTCGGGCAAATGGAATTCGGAGCCACTCTCTGAATCGGTGCTGCAGGAAGCTCGTATGGCTATTTCAACTATTCTTCAGGGGTTGGGGGTGTCGGAGGAAGACTCCCAGTCCATTGCGTCAAACTCACCCGGTTATTTGAACATGTTGGTGGAGAGAGTGAGGGATTTGGACCAGCTCTCCATGTGGGATTCCGATTCCGATAAACAAATTGCCGCCTTCAGCTTCAGGGATAAGCTTCTTCACATTGCTGCTCACAAGGGTAACAGCGGGAAAGTTGCCTATTTAGAGAGTCTCGGCTTCACTCTCTCTTCCTCTATCAATGTCGCCAGGCATCTATCCGCTGAGACGCTCCCATCTCTTATGCACAAGGTTACATGTATGAAGGAGCTCTTCTTTTCTGGCACTCATTGTGATGACTTCATTATCAGAAATATTCGCAGCATGATGCTGCGGTTATCAATTTCAATTGATGATGATCTGCAGCACACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTAAACATGCTGTCTTCCAAAGACCCCGCCTTCCGCTATTTGATTGAATCATTTCCTCGTCTACTTTCATTGTCTGTAAATAACCACATGATGCCTATAATGGACTTTCTTGAGAATATTGGAATCCCTAGATTTCGCATCCCAAACATAATAGTTTGTTTTCCACCCATTCTACTGTGGAGTGTTCAAGTCCTTAAATCTAAAGTCCTAGCTTTGAAAGAGATTGATGTGGTTGATATAGATTGTACCAAGTTGTTGCTAAAATATCCTTGGATTCTATCTACAAGCATTCAAGAGAACTATAAGGAGGTCCTTGCCTTTTTTTACTCTGAGAAGGTTTCAAAGACATGGATTGAGTCTGCAATCAAAAGCCAACCTCATTTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGGTGGATGAGTTGGCTGATCTTGGAGTTAAAGGAAAGAAGTTGGATAAGGTTGTTGCTAGAAGTCCTCAACTACTACTACGGAAGCCCAGAGACTTGCTACAGGTTATTCTGTTCTTTGAAAATATGGGTTTTGATAGAGAAACTATTGGGAGGGTTCTTTGTCGCTGCCCTCAAATTTTTGCTGCCAGCATTAATAAAACTCTAAAGAGGAAGATTGAGTTCCTTTGTGGGGTTGGTGTTTCTGAAGCTTATCTTCCTGGGGTTATCAGAAAGTATCCAGAATTACTTGTGTCTGATACTGAAAGAACTCTACTCCATCGGCTTATGTACTTGATGAAGCTGGGGCTTTCAGAGAAAGACATTGCATTTATGGTACGCACATTTTCTCCTATCCTGGGTTACAGTATAGAGGAGGTTCTGAGGCCAAAAATAGAATTCCTGGTGAACTCAATGGAGAGGCCGGTGAGAGATGTGGTGGGCTACCCCAGGTATTTTAGCTATTCATTAGAACAGAAGATAAAGCCAAGATATTGGGTGCTGAAAGCAAGGCGTATTGAATGTAGCTTAAAGGATATGCTGGGAAAAAACGATGAAGAATTTGCTGCAGACTTTTTGGGTGTAGGAAGTATACTTGTCCCTCCTCCTCCTCCCGTGTGTTCCGATGATAGATTGTAA 1824 0.4298 MLSQLVQIQTSSFFLPRERHRAERFLLLSKCLTFAFTPKFQFQFQFQFQFDYCETGSRSRLRRSGGCSSGKWNSEPLSESVLQEARMAISTILQGLGVSEEDSQSIASNSPGYLNMLVERVRDLDQLSMWDSDSDKQIAAFSFRDKLLHIAAHKGNSGKVAYLESLGFTLSSSINVARHLSAETLPSLMHKVTCMKELFFSGTHCDDFIIRNIRSMMLRLSISIDDDLQHTLSFFEKVEARRGGLNMLSSKDPAFRYLIESFPRLLSLSVNNHMMPIMDFLENIGIPRFRIPNIIVCFPPILLWSVQVLKSKVLALKEIDVVDIDCTKLLLKYPWILSTSIQENYKEVLAFFYSEKVSKTWIESAIKSQPHLLGCSTSKLKLMVDELADLGVKGKKLDKVVARSPQLLLRKPRDLLQVILFFENMGFDRETIGRVLCRCPQIFAASINKTLKRKIEFLCGVGVSEAYLPGVIRKYPELLVSDTERTLLHRLMYLMKLGLSEKDIAFMVRTFSPILGYSIEEVLRPKIEFLVNSMERPVRDVVGYPRYFSYSLEQKIKPRYWVLKARRIECSLKDMLGKNDEEFAADFLGVGSILVPPPPPVCSDDRL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2211 607 PANTHER CGI-12 PROTEIN-RELATED 191 313 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 PANTHER CGI-12 PROTEIN-RELATED 414 589 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 PANTHER CGI-12 PROTEIN-RELATED 309 408 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 538 569 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 292 322 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 433 464 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 398 428 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 363 393 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 505 537 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 256 287 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 SMART mt_12 469 500 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 Pfam mTERF 278 584 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 Pfam mTERF 91 313 IPR003690 GO:0003690|GO:0006355
Dod10g2211 607 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 191 313 - -
Dod10g2211 607 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 414 589 - -
Dod10g2211 607 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 309 408 - -
Dod10g2211 607 Gene3D Transcription termination factor 3, mitochondrial 356 591 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod10g2211 mTERF 1e-93 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2211 K15032 - gmx:100802127 704.516