Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2201 ATGAGCATGGCAAACATGGGCTCTACCTCGCGTGGTTCCACCTCCTCCTCCAATGGGCTCCTCACCGTCACCATCGCCGGCCGGAAGCATGACCATGTCGACGCCGCATCCGACAACGCCAATGATGAAGAGGACGACGACTTGCTCGTCGATCCCGACGATCCTTTCGACATTACGCACACCAAGAATGCCCCGCCCGAGACCCTCAAGCGTTGGAGACAAGCAGCATTCGTGCTCAATGCTTCAAGGCGCTTTAGATATACTTTGGACTTGAAAAAGGAAGGGGAGAAAGAGGAGAAGAAAAGCATGATCAGAGCCCATGCACAAGTCATAAGGGCAGCTTTGCTTTTCAGATTGGCTGGTGAACGCGAACTAGTGACCAGTACAGCAGTGGCATCCCCAACTCCAGTTGGTGACTATGAAGTTGGGCTTGAACAACTAGTTTCAATGTCTAAGGATCAGAATAGTCATGTTTTGCAGCAATATGGAGGGGTTAAAGGCTTATCAAATTTACTAAAATCAAATCCGGAGAAAGGCATCAATGGAGATGACGTTGATCTAATGAAACGGAAAAATGCATTTGGAACGAATACATATCCTCGGAAAAAGGGCAAAGGTTTCTGGAGGTTTCTATGGGAATCTTGGCAAGATCTGACCCTTATAATATTGATTATAGCAGCTACGGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGAAGAAGGATGGTATGATGGTGGAAGCATTGCTTTCGCAGTTTTGCTTGTTATTATGGTTACAGCTGTCAGTGATTATCGACAATCTCTCCAGTTTAAGAACTTGAACGCTGAAAAACAAAATATCCAATTGGAGGTCATTAGAGGCGGTAGAACAATAAAATTGTCCATTTTTGATGTTGTTGTTGGTGATGTAGTGCCCCTTAAAATAGGTGATCAGGTTCCTGCTGACGGAGTTTTAATCACTGGTCACTCAATTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATACACAAGGATCACAGAGCACCATTTTTGATGTCCGGTTGCAAAGTAGCAGATGGAGTTGGTACTATGCTGGTAACTGGTGTTGGCATTAACACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGACGATAATGGAGAAGAGACTCCGTTGCAGGTCCGACTGAATGGAGTAGCAACTTTTATTGGCATAGTTGGGCTTACCGTAGCCGTTTCTGTGCTTGCAGTCCTCTTGGGAAGATACTTCTCTGGCCGTTCCAAAGATTTAGACGGAAACGTGCAATTTGTTGCCGGAACGACTAGTGCTGGTGATGCCGTTGATGCAGTCATCAAAATTTTTACCATCGCAGTTACAATTGTGGTTGTTGCAGTGCCTGAAGGTCTGCCTTTAGCTGTTACCTTAACCCTGGCCTACTCAATGCGGAAAATGATGGCAGACAAAGCCTTGGTACGAAGGCTGTCAGCATGCGAAACCATGGGCTCTGCTACGACAATTTGTAGCGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAAGAAGAAACTAAATCCACCTGACGACTCATCAAATTTGCATCCAGAAGTTTTATCTCTGATAAATGAGGGCATTGCACAGAATACATCCGGCAATGTTTATGTGCCCAAGGATGGTGGAGAGACGGAAGTGTCAGGATCTCCAACAGAGAAGGCAATTCTCTCTTGGGCCGTCAAGTTGGGGATGAATTTCGATCTCACCAGATCAAGTTCGACGATTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAACGAGGTGGTGTTGCTGTGAAGCTGGCGGAATCTGGGGTGCATATACATTGGAAAGGAGCTGCGGAGATAGTTCTAGGAGCATGTAATCAATATCTTGATTCAAATGGTCACTTGCAATCTATCGAGAAAGAGAAGCTATTCTTCAAGGATGCTATTGAAGACATGGCTGTTCAGAGCTTGCGCTGTGTTGCCATTGCTTACAGACCATATGAATTGGACAAAGTTCCGTCCAACGGGGTAGATTTAGACCAGTGGTCCTTACCAGAACACGAGCTTGTTTTGCTTGCTATTGTTGGTATAAAGGATCCTTGTCGCCCTGGAGTCAGAGAAGCTGTGAAAACATGCGCTGAAGCTGGCGTTAAGGTACGCATGGTTACGGGCGACAATCTCCAAACAGCAAAGGCAATAGCTTTGGAGTGCGGAATACTGACTTCAATTGAGGATGCTGTTGAGCCAAATATCATTGAAGGAAAAGCATTCCGTGAACTATCTGAAAAAGAAAGGGAACATGTTGCTAAGAGAATAACGGTCATGGGGAGGTCTTCTCCTAACGACAAGCTTTTGCTCGTGCAAGCGCTGCGTAAACTCGGTGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCCCCTGCGCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATTCTGGATGATAATTTTGCATCGGTAGTAAAGGTTGTTCGCTGGGGCCGGTCTGTATATGCAAATATTCAGAAATTTATTCAGTTCCAGCTCACTGTTAACGTTGCTGCCCTTGTAATAAATGTTGTGGCCGCAATATCTTCAGGTCAAGTGCCTTTAAATGCAGTACAGCTTTTGTGGGTTAACCTTATCATGGATACACTTGGGGCCCTTGCACTCGCTACGGAACCACCAACCGAACGACTTATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTTATAACTAATGTCATGTGGAGGAACTTGCTCGTGCAGGCCCTGTATCAAATCACCGTTCTTCTCGTTCTCAACTTTGGTGGTGAGAGTATTCTACAAAATCAAGAAGACTCTAAGACTCGCACCTTACAAGTGAAGAATACTTTAATATTCAATGCATTCGTCCTATGCCAAATATTTAATGAGTTCAATGCTAGAAAACCAGATGAAATGAATGTCTTCCGAGGAGTGACTAAGAACCGTCTATTCATGGGAATCGTTGGAATGACCTTGGTGCTTCAGATAATCATGAGTGAGTTCCTCGGAAAGTTCACCAAAACGGTGAGGCTTGATTGGAAGCTGTGGCTTGGTTCTCTTGGAATTGGGCTTGTCAGCTGGCCGCTCGCAGTAGCTGGAAAACTCATTCCAGTTGCCAAAACACCATGGTCTCGAACCATCAGAAAGTATTTCAAGCGACTCAGGAAGTCTCGTGCTGCACAATAG 3300 0.4509 MSMANMGSTSRGSTSSSNGLLTVTIAGRKHDHVDAASDNANDEEDDDLLVDPDDPFDITHTKNAPPETLKRWRQAAFVLNASRRFRYTLDLKKEGEKEEKKSMIRAHAQVIRAALLFRLAGERELVTSTAVASPTPVGDYEVGLEQLVSMSKDQNSHVLQQYGGVKGLSNLLKSNPEKGINGDDVDLMKRKNAFGTNTYPRKKGKGFWRFLWESWQDLTLIILIIAATVSLALGIKTEGLEEGWYDGGSIAFAVLLVIMVTAVSDYRQSLQFKNLNAEKQNIQLEVIRGGRTIKLSIFDVVVGDVVPLKIGDQVPADGVLITGHSIAIDESSMTGESKIIHKDHRAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISDDNGEETPLQVRLNGVATFIGIVGLTVAVSVLAVLLGRYFSGRSKDLDGNVQFVAGTTSAGDAVDAVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGKKKLNPPDDSSNLHPEVLSLINEGIAQNTSGNVYVPKDGGETEVSGSPTEKAILSWAVKLGMNFDLTRSSSTILHVFPFNSEKKRGGVAVKLAESGVHIHWKGAAEIVLGACNQYLDSNGHLQSIEKEKLFFKDAIEDMAVQSLRCVAIAYRPYELDKVPSNGVDLDQWSLPEHELVLLAIVGIKDPCRPGVREAVKTCAEAGVKVRMVTGDNLQTAKAIALECGILTSIEDAVEPNIIEGKAFRELSEKEREHVAKRITVMGRSSPNDKLLLVQALRKLGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGQVPLNAVQLLWVNLIMDTLGALALATEPPTERLMHRSPVGRREPLITNVMWRNLLVQALYQITVLLVLNFGGESILQNQEDSKTRTLQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNRLFMGIVGMTLVLQIIMSEFLGKFTKTVRLDWKLWLGSLGIGLVSWPLAVAGKLIPVAKTPWSRTIRKYFKRLRKSRAAQ* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2201 1099 CDD P-type_ATPase_Ca_PMCA-like 189 945 - -
Dod10g2201 1099 Gene3D - 502 857 IPR023214 -
Dod10g2201 1099 Pfam Cation transporter/ATPase, N-terminus 163 230 IPR004014 -
Dod10g2201 1099 Pfam haloacid dehalogenase-like hydrolase 502 826 - -
Dod10g2201 1099 ProSitePatterns E1-E2 ATPases phosphorylation site. 507 513 IPR018303 -
Dod10g2201 1099 Gene3D - 515 712 IPR023299 GO:0000166
Dod10g2201 1099 SFLD Haloacid Dehalogenase 487 864 - -
Dod10g2201 1099 MobiDBLite consensus disorder prediction 1 23 - -
Dod10g2201 1099 SUPERFAMILY Calcium ATPase, transduction domain A 283 378 IPR008250 -
Dod10g2201 1099 SUPERFAMILY HAD-like 503 917 IPR036412 -
Dod10g2201 1099 Pfam Ca2+-ATPase N terminal autoinhibitory domain 53 95 IPR024750 GO:0005516
Dod10g2201 1099 PANTHER CATION TRANSPORTING ATPASE 53 1086 - -
Dod10g2201 1099 PRINTS Sodium/potassium-transporting ATPase signature 498 519 - -
Dod10g2201 1099 PRINTS Sodium/potassium-transporting ATPase signature 248 268 - -
Dod10g2201 1099 PRINTS Sodium/potassium-transporting ATPase signature 624 642 - -
Dod10g2201 1099 Pfam E1-E2 ATPase 282 483 - -
Dod10g2201 1099 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 717 IPR023299 GO:0000166
Dod10g2201 1099 PANTHER CALCIUM-TRANSPORTING ATPASE 53 1086 - -
Dod10g2201 1099 Pfam Cation transporting ATPase, C-terminus 897 1073 IPR006068 -
Dod10g2201 1099 Gene3D - 213 1063 - -
Dod10g2201 1099 Gene3D - 66 118 - -
Dod10g2201 1099 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 440 534 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g2201 1099 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 778 893 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g2201 1099 SUPERFAMILY Calcium ATPase, transmembrane domain M 162 1078 IPR023298 -
Dod10g2201 1099 Gene3D - 188 381 - -
Dod10g2201 1099 SFLD p-type atpase 487 864 IPR044492 -
Dod10g2201 1099 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 151 1076 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dod10g2201 1099 PRINTS P-type cation-transporting ATPase superfamily signature 836 848 - -
Dod10g2201 1099 PRINTS P-type cation-transporting ATPase superfamily signature 812 831 - -
Dod10g2201 1099 PRINTS P-type cation-transporting ATPase superfamily signature 705 716 - -
Dod10g2201 1099 PRINTS P-type cation-transporting ATPase superfamily signature 727 737 - -
Dod10g2201 1099 PRINTS P-type cation-transporting ATPase superfamily signature 505 519 - -
Dod10g2201 1099 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Dod10g2201 1099 SMART Cation_ATPase_N_a_2 161 235 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2201 Dod-Chr10 43964848 43991559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2201 13 1098 Primary Pumps ATPases AT3G21180 75.321 0.0 1649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2201 K01537 - gmx:100817367 1791.93