Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2196 ATGCAGATGCAGATGGGGCCTGTGGATTTCGAGGAGGAGGAGGAGACGACTCCCTTCACCTCTTCTTCCTCTTCTTCACCATCTGCCAGGAAAGCAGTCCACACGTTCAATTTCGAGGCAAGCGGCGTGCTCTCTCATCATCATCATCATCATCATCTTCCTGTTGCAGATTTGCCCAAAGCAGCAGCAGCAGCAGCAGCATCTACTTCTTCTTCTTATCTCTTGAAGGTTTTGCGCTTCAGACCCGTTCGGAGCGCATATGCTGTCTTATTTAGAGCCAGGATCAACATCTTGCTCCCCTTTGGTCCCTTGGCCGTGCTCCTACATTATCTCACCGGAAAGCATGGATGGGTGTTCTTCTTCAGCTTATTGGGTATTGCTCCTTTGGCAGAACGTCTGGGTTATATTACCGAGCAACTTGCATTCTACACAGGAACAACAGTTGGGGGTCTGCTCAATGCCACATTTGGCAATGCAACCGAAATGATCATATCAATCTTCGCACTGAAAAACGATATGATTAGGGTTGTGCAGCAATCTTTACTTGGCTCAATCTTGTCAAATATGCTTCTAGTTCTTGGATGTGCATTTTTTACTGGTGGAATTGTTCACCGCAAAAAAGTTCAGGTTTTTAATAAGGCAGCTGCTGTTGTCAATTCTGGGTTGCTGTTGATGGCTGTAATGGGAATACTGTTTCCTGCAGTGCTTCACTTTACTCACTCAGAGGTTCATCTTGGGAAGTCAGTGCTATCTCTATCAAGATTTAGCAGCTGTGTGATGCTAGTGGCATATGCGAGCTATCTTTTCTTTCAACTTAAAAGTCAGCCAAATTGTCCTGTTGATGAGGAAGGAGATAATACTGAAAATTCAGACGAGGAGGAAGAACTTGAATTAACTCAATGGGAAGCAATAGTCTGGCTTGCTATTCTGACTGCATGCATATCTATATTGTCTGAATACCTTGTAGACGCCATAGAGGGAGCATCTGAGTCATTAAATATGTCGATGGCTTTTATCAGTGTCATCTTGCTTCCAATTGTAGGCAATGCGGCAGAACATGCAAGTGCTATCATGTTTGCCGTGAAGGACAAGCTTAATATCACAATTGGAGTTGCTATTGGATCATCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTGGTGGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACCGTGCTGGTGGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGGTTGATGCTTGTTCTATGCTATCTCATAGTTGCTGCCAGTTTTTTCGTACATGTCGACCCTAAAAGTGGTGAGTTTACTGAGAATATACTGCATAATTCATAG 1395 0.4337 MQMQMGPVDFEEEEETTPFTSSSSSSPSARKAVHTFNFEASGVLSHHHHHHHLPVADLPKAAAAAAASTSSSYLLKVLRFRPVRSAYAVLFRARINILLPFGPLAVLLHYLTGKHGWVFFFSLLGIAPLAERLGYITEQLAFYTGTTVGGLLNATFGNATEMIISIFALKNDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHRKKVQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCVMLVAYASYLFFQLKSQPNCPVDEEGDNTENSDEEEELELTQWEAIVWLAILTACISILSEYLVDAIEGASESLNMSMAFISVILLPIVGNAAEHASAIMFAVKDKLNITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLVLCYLIVAASFFVHVDPKSGEFTENILHNS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2196 464 Gene3D - 290 447 IPR044880 -
Dod10g2196 464 Gene3D - 144 283 IPR044880 -
Dod10g2196 464 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 66 455 IPR004713 GO:0006812|GO:0008324|GO:0016021
Dod10g2196 464 PANTHER VACUOLAR CATION/PROTON EXCHANGER 66 455 - -
Dod10g2196 464 TIGRFAM cax: calcium/proton exchanger 98 446 IPR004798 GO:0006816|GO:0015369
Dod10g2196 464 Pfam Sodium/calcium exchanger protein 117 272 IPR004837 GO:0016021|GO:0055085
Dod10g2196 464 Pfam Sodium/calcium exchanger protein 304 443 IPR004837 GO:0016021|GO:0055085
Dod10g2196 464 TIGRFAM caca2: calcium/proton exchanger 88 446 - -
Dod10g2196 464 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2196 Dod-Chr10 43886139 43894556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2196 83 455 Antiporters AT1G55730 73.404 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2196 K07300 - gmx:100806000 629.787